RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 PDCD4Q53EL6 469 aaKnown RBP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 SPANXN4Q5MJ08 99 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 EPGNQ6UW88 154 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 ACAD11Q709F0 780 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 MAMDC2Q7Z304 686 aaPredicted RBP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 MAVSQ7Z434 540 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 MRGPRGQ86SM5 289 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 CLECL1Q8IZS7 167 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 OR4A15Q8NGL6 344 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 CKAP2Q8WWK9 683 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 ITLN2Q8WWU7 325 aaPredicted RBP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 CHMP6Q96FZ7 201 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 MAGEB18Q96M61 343 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 YIPF4Q9BSR8 244 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 BTBD2Q9BX70 525 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 GPATCH2Q9NW75 528 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 PLEKHB1Q9UF11 243 aaPredicted RBP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 MRPS18CQ9Y3D5 142 aaKnown RBP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 NCOA6Q14686 2063 aaPredicted RBP22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 ADAM10O14672 748 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 DIAPH2O60879 1101 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 KCNK2O95069 426 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 UTS2O95399 124 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 NGFRP08138 427 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 GABRA1P14867 456 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 ENDOUP21128 410 aaKnown RBP22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 SRD5A2P31213 254 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 SOAT1P35610 550 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 FAM174BQ3ZCQ3 159 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 NHSL2Q5HYW2 709 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 EMC4Q5J8M3 183 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 FBXO30Q8TB52 745 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 OR2B2Q9GZK3 357 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 SLCO1B3Q9NPD5 702 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 PNPLA3Q9NST1 481 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 PPP4R1LQ9P1A2 415 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 SPRR3Q9UBC9 169 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 BTNL2Q9UIR0 455 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 NAV2Q8IVL1 2488 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 COL12A1Q99715 3063 aa22.19■■□□□ 1.14
SDF2L1-201ENST00000248958 LRRK2Q5S007 2527 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 PHF3Q92576 2039 aaKnown RBP22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 DUXAA6NLW8 204 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 UBDO15205 165 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 PTGER4P35408 488 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 TRPC1P48995 793 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 PHC1P78364 1004 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 ADORA2A-AS1P86434 159 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 PM20D2Q8IYS1 436 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 FAM83FQ8NEG4 500 aaPredicted RBP22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 TBL1XR1Q9BZK7 514 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 SERHLQ9NQF3 203 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 ZIM2Q9NZV7 527 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 HRH3Q9Y5N1 445 aa22.18■■□□□ 1.14
SDF2L1-201ENST00000248958 C15orf38-AP3S2A0A0A6YYH1 394 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 SCO2O43819 266 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 CPSF4O95639 269 aaKnown RBP22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 ACTL6AO96019 429 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 IGKV1D-16P01601 117 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 PGRP06401 933 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 UQCRC2P22695 453 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 ACVR2AP27037 513 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 NME5P56597 212 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 C17orf67Q0P5P2 114 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 SF3B4Q15427 424 aaKnown RBP eCLIP22.17■■□□□ 1.144e-9■■■□□ 17.4
SDF2L1-201ENST00000248958 WIPI1Q5MNZ9 446 aaPredicted RBP22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 ZNF585AQ6P3V2 769 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 FIGNL1Q6PIW4 674 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 C6orf120Q7Z4R8 191 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 OR4K17Q8NGC6 315 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 OR5M9Q8NGP3 310 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 OR5AK3PQ8NH89 298 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 CDS1Q92903 461 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 TEX37Q96LM6 180 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 CCDC115Q96NT0 180 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 OR52B2Q96RD2 323 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 COQ3Q9NZJ6 369 aa22.17■■□□□ 1.14
SDF2L1-201ENST00000248958 RNF103-CHMP3A0A140T963 221 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 A1L4Q6 167 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 POLR3GO15318 223 aaPredicted RBP22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 SLC22A3O75751 556 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 CLDN1O95832 211 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 IL6P05231 212 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 TBXA2RP21731 343 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 MATN1P21941 496 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 DSCR4P56555 118 aaPredicted RBP22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 CRYZQ08257 329 aaKnown RBP22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 ART3Q13508 389 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 GANABQ14697 944 aaKnown RBP22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 GRAMD1BQ3KR37 738 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 EIPR1Q53HC9 387 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 VASNQ6EMK4 673 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 C3P1Q6ZMU1 363 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 FADS6Q8N9I5 356 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 OR14L1PQ8NHC6 308 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 GOT1L1Q8NHS2 421 aaPredicted RBP22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 SLC35G5Q96KT7 338 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 OR7D2Q96RA2 312 aa22.16■■□□□ 1.14
SDF2L1-201ENST00000248958 OR52E6Q96RD3 313 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms