RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 PEX12O00623 359 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 HPGDSO60760 199 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 APODP05090 189 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 MRPL3P09001 348 aaKnown RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 CPN2P22792 545 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 WNT4P56705 351 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 MLLT11Q13015 90 aaPredicted RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 RUNX2Q13950 521 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 EXOSC7Q15024 291 aaKnown RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 OCLNQ16625 522 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 DUSP5Q16690 384 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 FAM27D1Q5T7N8 215 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 MEDAGQ5VYS4 303 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 FBXO42Q6P3S6 717 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 IL20RBQ6UXL0 311 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 GDF7Q7Z4P5 450 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 KLBQ86Z14 1044 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 FLCNQ8NFG4 579 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 PFN4Q8NHR9 129 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 TMEM163Q8TC26 289 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 ITPKCQ96DU7 683 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 SECISBP2Q96T21 854 aaKnown RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 TTYH2Q9BSA4 534 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 HCAR1Q9BXC0 346 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 PBX4Q9BYU1 374 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 HOXD1Q9GZZ0 328 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 NEK6Q9HC98 313 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 C20orf141Q9NUB4 165 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 ZSCAN32Q9NX65 697 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 DIMT1Q9UNQ2 313 aaKnown RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 TDRD6O60522 2096 aaKnown RBP8.55□□□□□ -1.04
SYDE2-201ENST00000234668 WDFY3Q8IZQ1 3526 aa8.55□□□□□ -1.04
SYDE2-201ENST00000234668 KIF26AQ9ULI4 1882 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 A0A0G2JPF8 293 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 A0A1W2PPK0 400 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HNRNPCL2B2RXH8 293 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HNRNPCL3B7ZW38 293 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 K7EQS6 105 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 DYRK3O43781 588 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PRICKLE3O43900 615 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 UBXN7O94888 489 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 GYPBP06028 91 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HNRNPCL4P0DMR1 293 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CLUP10909 449 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 OMPP47874 163 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 IFITM2Q01629 132 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TEKQ02763 1124 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TMEM196Q5HYL7 178 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PLBD1Q6P4A8 553 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PAMR1Q6UXH9 720 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CYB561A3Q8NBI2 242 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TMEM52Q8NDY8 209 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SPRYD4Q8WW59 207 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 DIO2Q92813 273 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 RELTQ969Z4 430 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TXNDC15Q96J42 360 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 OR51V1Q9H2C8 321 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SRMSQ9H3Y6 488 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CCDC86Q9H6F5 360 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TRIM45Q9H8W5 580 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 C3orf14Q9HBI5 128 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 FBXL4Q9UKA2 621 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ADAM29Q9UKF5 820 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CLEC4AQ9UMR7 237 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 WDR45Q9Y484 360 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 N6AMT1Q9Y5N5 214 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 EPOPA6NHQ4 379 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PRODHO43272 600 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HCRTR1O43613 425 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TBX19O60806 448 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 C5AR1P21730 350 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CMPK1P30085 196 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ACSL1P33121 698 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PPP1CAP62136 330 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 RPS21P63220 83 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 EFNB1P98172 346 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 COX10Q12887 443 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TRAM2Q15035 370 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PRRT3Q5FWE3 981 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PDZK1Q5T2W1 519 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 WDR88Q6ZMY6 472 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 OR51A7Q8NH64 312 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 GRHL3Q8TE85 626 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SLC25A46Q96AG3 418 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 GIMAP5Q96F15 307 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SLC41A3Q96GZ6 507 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 KCTD7Q96MP8 289 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 FYTTD1Q96QD9 318 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SPATA5L1Q9BVQ7 753 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PINK1Q9BXM7 581 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SRRQ9GZT4 340 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 C11orf54Q9H0W9 315 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HINT3Q9NQE9 182 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PLSCR3Q9NRY6 295 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 NDOR1Q9UHB4 597 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms