RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 OR4K17Q8NGC6 315 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 ZBTB8AQ96BR9 441 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 SLCO5A1Q9H2Y9 848 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 TUBG2Q9NRH3 451 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 RPS10-NUDT3A0A1W2PQS6 291 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 B3GALNT1O75752 331 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 FCER2P06734 321 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 RPS10P46783 165 aaKnown RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 FAM199XQ6PEV8 388 aaPredicted RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 SCARB1Q8WTV0 552 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 TMEM19Q96HH6 336 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 RPP30P78346 268 aaKnown RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 SLC10A2Q12908 348 aaPredicted RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 ZFAND1Q8TCF1 268 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 ACTRT3Q9BYD9 372 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 A8MVJ9 347 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 ZNF16P17020 682 aaPredicted RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 SMPD1P17405 629 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 PAGE3Q5JUK9 113 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 ACOT11Q8WXI4 607 aaPredicted RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 SYT11Q9BT88 431 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 NRP1O14786 923 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 NDUFB2O95178 105 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 INHAP05111 366 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 CAV2P51636 162 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 HIST2H3AQ71DI3 136 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 PTRH1Q86Y79 214 aaKnown RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 MRPL41Q8IXM3 137 aaKnown RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 POU2F3Q9UKI9 436 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 A0A0A6YYH2 397 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 SLC22A23A1A5C7 686 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 A6NJ64 397 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 GBAP04062 536 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 CREB5Q02930 508 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 AWAT2Q6E213 333 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 SPATC1Q76KD6 591 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 FAM46AQ96IP4 442 aaKnown RBP7.79□□□□□ -1.16
APOB-201ENST00000233242 SLC12A9Q9BXP2 914 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 PSORS1C1Q9UIG5 152 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 MON2Q7Z3U7 1717 aa7.79□□□□□ -1.16
APOB-201ENST00000233242 THBS2P35442 1172 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 FAM124AQ86V42 546 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 GGHQ92820 318 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 TMEM175Q9BSA9 504 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 SAMD10Q9BYL1 202 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PELI2Q9HAT8 420 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 MAN2C1Q9NTJ4 1040 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 VAPAQ9P0L0 249 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PCDHA9Q9Y5H5 950 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 HLA-AP01891 365 aaKnown RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 S100A11P31949 105 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 ZNF425Q6IV72 752 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PRSS55Q6UWB4 352 aaPredicted RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 CBY1Q9Y3M2 126 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 LOC102723532A0A0G2JNH3 316 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 RPS15AP62244 130 aaKnown RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 RPL22L1Q6P5R6 122 aaKnown RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 SYNPRQ8TBG9 265 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 KLRF1Q9NZS2 232 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 MUSKO15146 869 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 FABP7O15540 132 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 HBE1P02100 147 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 ERVPABLB-1P60509 514 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 RAB4BP61018 213 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 DCST2Q5T1A1 773 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 CBLL1Q75N03 491 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PARPBPQ9NWS1 579 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 TSPAN11A1L157 253 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 SNRNP70P08621 437 aaKnown RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 CSNK2A1P68400 391 aaPredicted RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 CYP27C1Q4G0S4 372 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 TMEM41BQ5BJD5 291 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 COMMD6Q7Z4G1 85 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 CSNK2A3Q8NEV1 391 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PXT1Q8NFP0 134 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 MYH14Q7Z406 1995 aaKnown RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 PDGFRLQ15198 375 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 ACSM3Q53FZ2 586 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PDZD3Q86UT5 571 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 LILRB2Q8N423 598 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 IQCF1Q8N6M8 205 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PAQR8Q8TEZ7 354 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 EMCNQ9ULC0 261 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 POLHQ9Y253 713 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 ETV7Q9Y603 341 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 SMIM18P0DKX4 95 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 GNSP15586 552 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 ZNF84P51523 738 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 DBPQ10586 325 aaPredicted RBP7.78□□□□□ -1.16
APOB-201ENST00000233242 GPR50Q13585 617 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 TCTE1Q5JU00 501 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 SOHLH1Q5JUK2 328 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 FRMPD2BQ6IN97 320 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 SLC30A7Q8NEW0 376 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 PMEPA1Q969W9 287 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 RAB39BQ96DA2 213 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 ANKRD28O15084 1053 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 MAFKO60675 156 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 UBL4AP11441 157 aa7.78□□□□□ -1.16
APOB-201ENST00000233242 BPIP17213 487 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms