RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 EOMESO95936 686 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 OC90Q02509 493 aaPredicted RBP13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 C6orf120Q7Z4R8 191 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 HMGB4Q8WW32 186 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 ALG14Q96F25 216 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 FCRL4Q96PJ5 515 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 SLC38A2Q96QD8 506 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 NIT2Q9NQR4 276 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 DLL4Q9NR61 685 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 IMP3Q9NV31 184 aaKnown RBP13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 SLCO1C1Q9NYB5 712 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 GPR160Q9UJ42 338 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 TMEM5Q9Y2B1 443 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 UNC80Q8N2C7 3258 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 ANXA2P2A6NMY6 339 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 TFP02787 698 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 H2AFB2P0C5Z0 115 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 ELNP15502 786 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 CPEP16870 476 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 TRIM23P36406 574 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 HIST2H2AA3Q6FI13 130 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 TMEM107Q6UX40 140 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 COMTD1Q86VU5 262 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 FAM181AQ8N9Y4 354 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 SORCS1Q8WY21 1168 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 YIPF5Q969M3 257 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 SLC22A11Q9NSA0 550 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 SCP2D1Q9UJQ7 156 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 VWA8A3KMH1 1905 aa13.3□□□□□ -0.28
PCDHB3-201ENST00000231130 FXYD6-FXYD2A0A087WZ82 144 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SPTBP11277 2137 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SLC6A1P30531 599 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 BTG1P62324 171 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 LTB4RQ15722 352 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ST3GAL2Q16842 350 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TMEM163Q8TC26 289 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TEFMQ96QE5 360 aaKnown RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 GSDMCQ9BYG8 508 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 FXYD6Q9H0Q3 95 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ZCCHC4Q9H5U6 513 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TAS2R7Q9NYW3 318 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TAAR2Q9P1P5 351 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CSNK1G3Q9Y6M4 447 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 GABRPO00591 440 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 YKT6O15498 198 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 EGFP01133 1207 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 MT-ND4P03905 459 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 PCSK2P16519 638 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 PVALBP20472 110 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SELENOPP49908 381 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CDH11P55287 796 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 EEF1A2Q05639 463 aaKnown RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SLCO4C1Q6ZQN7 724 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 DNAJB7Q7Z6W7 309 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TEX47Q8TBZ9 253 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 F2RL3Q96RI0 385 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ATF6BQ99941 703 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CRB3Q9BUF7 120 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 BCL2L14Q9BZR8 327 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CWH43Q9H720 699 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 TAS2R3Q9NYW6 316 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 MRTO4Q9UKD2 239 aaKnown RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ZC3H12DA2A288 527 aaKnown RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 FAAHO00519 579 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ZNF821O75541 412 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ERAL1O75616 437 aaKnown RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SPDEFO95238 335 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 RLN2P04090 185 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 MC2RQ01718 297 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 CD276Q5ZPR3 534 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ADCK2Q7Z695 626 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 PDZD9Q8IXQ8 264 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 OR51G2Q8NGK0 314 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 SMAP2Q8WU79 429 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ZNF285Q96NJ3 590 aa13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 PITHD1Q9GZP4 211 aaPredicted RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
PCDHB3-201ENST00000231130 H7C4K7 107 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 GNB5O14775 395 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 GALTP07902 379 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 ADRB1P08588 477 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 FAM157BP0CG42 384 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 MPC1LP0DKB6 136 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 PEPDP12955 493 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 PCBP3P57721 371 aaKnown RBP13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 S100A12P80511 92 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 AKIRIN2Q53H80 203 aa13.28□□□□□ -0.28
PCDHB3-201ENST00000231130 TMEM91Q6ZNR0 172 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms