RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 Q6ZVL8 140 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 LILRA3Q8N6C8 439 aaPredicted RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 SLC5A11Q8WWX8 675 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 ASB12Q8WXK4 309 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 PTP4A1Q93096 173 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 KLHL1Q9NR64 748 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 ANKDD1BA6NHY2 528 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 NPC1O15118 1278 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 WNT1P04628 370 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 ARAFP10398 606 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 IMPA1P29218 277 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 OC90Q02509 493 aaPredicted RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 SLC25A35Q3KQZ1 300 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 C3P1Q6ZMU1 363 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 TOMM5Q8N4H5 51 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 FAM26EQ8N5C1 309 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 PLA2G15Q8NCC3 412 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 TMEM19Q96HH6 336 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 MRPL39Q9NYK5 338 aaKnown RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 GPR160Q9UJ42 338 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 MGAT4BQ9UQ53 548 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 ZNF98A6NK75 572 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 C5orf58C9J3I9 102 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 RNASET2O00584 256 aaKnown RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 GRM6O15303 877 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 TSPAN6O43657 245 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 SLC16A8O95907 504 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 H2AFB2P0C5Z0 115 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 SULT1A3P0DMM9 295 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 SULT1A4P0DMN0 295 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 PREPP48147 710 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 PITPNBP48739 271 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 TAS2R50P59544 299 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 POLR2LP62875 67 aaKnown RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 EIF2B5Q13144 721 aaKnown RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 NHLRC3Q5JS37 347 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 HDDC2Q7Z4H3 204 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 OR2A12Q8NGT7 310 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 OR56A3Q8NH54 315 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 SMAP2Q8WU79 429 aaPredicted RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 ZNF707Q96C28 371 aaPredicted RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 ZNF558Q96NG5 402 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 NPAS1Q99742 590 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 ZNF436Q9C0F3 470 aaPredicted RBP13.22□□□□□ -0.29
SF1-201ENST00000227503 ABCG4Q9H172 646 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 AUNIPQ9H7T9 357 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 CA10Q9NS85 328 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 CNIH4Q9P003 139 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 NDOR1Q9UHB4 597 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
SF1-201ENST00000227503 NMBP08949 121 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 ACP2P11117 423 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 TIA1P31483 386 aaKnown RBP eCLIP13.21□□□□□ -0.292e-7■■■■□ 24.6
SF1-201ENST00000227503 DGKGP49619 791 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 CTSCP53634 463 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 EOGTQ5NDL2 527 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 CD200R1LQ6Q8B3 271 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 OXR1Q8N573 874 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 OR5M3Q8NGP4 307 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 GOT1L1Q8NHS2 421 aaPredicted RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 MYLIPQ8WY64 445 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 HGDQ93099 445 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 PPCDCQ96CD2 204 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 OR2M2Q96R28 347 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 SEC22CQ9BRL7 303 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 POLDIP3Q9BY77 421 aaKnown RBP13.21□□□□□ -0.29
SF1-201ENST00000227503 SERHL2Q9H4I8 314 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 CXorf36Q9H7Y0 433 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 PCDHB16Q9NRJ7 776 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 SH2B3Q9UQQ2 575 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 CHST2Q9Y4C5 530 aa13.21□□□□□ -0.29
SF1-201ENST00000227503 FAM183AA6NL82 134 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 PDCD5O14737 125 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 SLC2A10O95528 541 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 ATP6V1E1P36543 226 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 MAZP56270 477 aaKnown RBP13.21□□□□□ -0.3
SF1-201ENST00000227503 E2F1Q01094 437 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 GNA13Q14344 377 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 TMEM255AQ5JRV8 349 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 HENMT1Q5T8I9 393 aaKnown RBP13.21□□□□□ -0.3
SF1-201ENST00000227503 TMPRSS11BQ86T26 416 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 TMEM25Q86YD3 366 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 THAP4Q8WY91 577 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 SLC46A2Q9BY10 475 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 REEP4Q9H6H4 257 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 NANSQ9NR45 359 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 CYSLTR2Q9NS75 346 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 HPF1Q9NWY4 346 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms