RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ZNF318Q5VUA4 2279 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 SMIM30A4D0T7 59 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 H0YGG7 62 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 PROM1O43490 865 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 SLC34A2O95436 690 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 PTHP01270 115 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 ALOX5P09917 674 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 NT5EP21589 574 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 ELAVL4P26378 380 aaKnown RBP9.33□□□□□ -0.92
USP11-201ENST00000218348 ST13P50502 369 aaKnown RBP9.33□□□□□ -0.92
USP11-201ENST00000218348 ARF3P61204 181 aaPredicted RBP9.33□□□□□ -0.92
USP11-201ENST00000218348 STXBP1P61764 594 aaKnown RBP9.33□□□□□ -0.92
USP11-201ENST00000218348 FAPQ12884 760 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 UBXN2BQ14CS0 331 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 ZC3H12BQ5HYM0 836 aaKnown RBP9.33□□□□□ -0.92
USP11-201ENST00000218348 ZNF311Q5JNZ3 666 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 COLEC12Q5KU26 742 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 RSBN1Q5VWQ0 802 aaPredicted RBP9.33□□□□□ -0.92
USP11-201ENST00000218348 FIGNL1Q6PIW4 674 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 P2RY8Q86VZ1 359 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 LINC00518Q8N0U6 118 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 TMEM52Q8NDY8 209 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 B3GNT7Q8NFL0 401 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 ADAMTS15Q8TE58 950 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 AKAP1Q92667 903 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP11-201ENST00000218348 SLC6A18Q96N87 628 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 OR7D2Q96RA2 312 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 GPA33Q99795 319 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 CCDC3Q9BQI4 270 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 FBXO34Q9NWN3 711 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 POFUT2Q9Y2G5 429 aa9.33□□□□□ -0.92
USP11-201ENST00000218348 YKT6O15498 198 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 GKN3PP0CG01 181 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 MYF5P13349 255 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 OR3A3P47888 321 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 PDX1P52945 283 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ZIC1Q15915 447 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 SLC48A1Q6P1K1 146 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 B3GLCTQ6Y288 498 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 PAQR7Q86WK9 346 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 KRT73Q86Y46 540 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 RAB2BQ8WUD1 216 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 HTRA1Q92743 480 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 FKBP10Q96AY3 582 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 OR5M11Q96RB7 305 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 CHCHD6Q9BRQ6 235 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 TMEM246Q9BRR3 403 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 RAB11FIP5Q9BXF6 653 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 DUSP21Q9H596 190 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 EGLN3Q9H6Z9 239 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ZBTB20Q9HC78 741 aaPredicted RBP9.32□□□□□ -0.92
USP11-201ENST00000218348 FAM60AQ9NP50 221 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 EXOSC4Q9NPD3 245 aaKnown RBP9.32□□□□□ -0.92
USP11-201ENST00000218348 ATP13A2Q9NQ11 1180 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 PLSCR3Q9NRY6 295 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 OR6C2Q9NZP2 312 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ZNF229Q9UJW7 825 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 MKL2Q9ULH7 1088 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ASCC3Q8N3C0 2202 aaKnown RBP9.32□□□□□ -0.92
USP11-201ENST00000218348 GPR89AB7ZAQ6 455 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 GNB5O14775 395 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ENTPD6O75354 484 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 GPR89BP0CG08 455 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 HOXA6P31267 233 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 OPRL1P41146 370 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 KCNJ5P48544 419 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 CRISP1P54107 249 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 TAS2R41P59536 307 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 MAT1AQ00266 395 aaKnown RBP9.32□□□□□ -0.92
USP11-201ENST00000218348 ZNF425Q6IV72 752 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 PAQR6Q6TCH4 344 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 MFSD9Q8NBP5 474 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 OR10Z1Q8NGY1 313 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ELP4Q96EB1 424 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 ERVMER34-1Q9H9K5 563 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
USP11-201ENST00000218348 NUPL2O15504 423 aaKnown RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 LRRTM2O43300 516 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TLX2O43763 284 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 CYP7B1O75881 506 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 EPPINO95925 133 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 DRD2P14416 443 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 FUT1P19526 365 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 CBLP22681 906 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TGM3Q08188 693 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 IL18R1Q13478 541 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 CTF1Q16619 201 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TIGD6Q17RP2 521 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 TMEM35AQ53FP2 167 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ADCK1Q86TW2 530 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 AMER2Q8N7J2 671 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 AVL9Q8NBF6 648 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 OR4K5Q8NGD3 323 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 RERGQ96A58 199 aaPredicted RBP9.31□□□□□ -0.92
USP11-201ENST00000218348 ZNF354BQ96LW1 612 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 UCK2Q9BZX2 261 aa9.31□□□□□ -0.92
USP11-201ENST00000218348 PITHD1Q9GZP4 211 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms