RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PTHLHP12272 177 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 NPR2P20594 1047 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 NFYBP25208 207 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.25e-18■■■□□ 16.2
PTPRA-201ENST00000216877 AHRP35869 848 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 PNPLA4P41247 253 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 SSX2Q16385 188 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 C1orf52Q8N6N3 182 aaKnown RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 BMPERQ8N8U9 685 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 OR51G2Q8NGK0 314 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 OR4C15Q8NGM1 316 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 OR6K2Q8NGY2 324 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 GLYATL2Q8WU03 294 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 ZBED3Q96IU2 234 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 ORAI3Q9BRQ5 295 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 RSRP1Q9BUV0 290 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 SARGQ9BW04 601 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 ABCG4Q9H172 646 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 NOX3Q9HBY0 568 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 CYSLTR2Q9NS75 346 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 CASTOR2A6NHX0 329 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 GATCO43716 136 aaKnown RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 BNIP3LO60238 219 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 OLFM2O95897 454 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 PAK4O96013 591 aaPredicted RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 IGHA2P01877 340 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 CSF2RBP32927 897 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 FABP9Q0Z7S8 132 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 ARMC12Q5T9G4 340 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 CDC73Q6P1J9 531 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 IQCHQ86VS3 1027 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF433Q8N7K0 673 aaPredicted RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 ASB8Q9H765 288 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 KCNK12Q9HB15 430 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 ABCC13Q9NSE7 274 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 PQLC2LA1A4F0 135 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 OR14I1A6ND48 311 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 SOX30O94993 753 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 LGALS2P05162 132 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 DGKAP23743 735 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 GPR15P49685 360 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 PGFP49763 221 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 RAP2BP61225 183 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 LSM11P83369 360 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 EIF2S3LQ2VIR3 472 aaKnown RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 TRIM46Q7Z4K8 759 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 DCUN1D3Q8IWE4 304 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 KLHL36Q8N4N3 616 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 CSGALNACT1Q8TDX6 532 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 MED8Q96G25 268 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 CRLS1Q9UJA2 301 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 TBX18O95935 607 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 EPHX1P07099 455 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 PSMB1P20618 241 aaKnown RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 DGKGP49619 791 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 SLC9A5Q14940 896 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF565Q8N9K5 539 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 STK35Q8TDR2 534 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 RBM14Q96PK6 669 aaKnown RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 NLE1Q9NVX2 485 aaPredicted RBP13.79□□□□□ -0.2
PTPRA-201ENST00000216877 ANGPT4Q9Y264 503 aa13.79□□□□□ -0.2
PTPRA-201ENST00000216877 SEMG1P04279 462 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 OR12D1P0DN82 309 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 UGT2B7P16662 529 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 LUMP51884 338 aaPredicted RBP13.78□□□□□ -0.2
PTPRA-201ENST00000216877 TPBGQ13641 420 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 SLC25A35Q3KQZ1 300 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 DCAF4L1Q3SXM0 396 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 XKR6Q5GH73 641 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 FRG2Q64ET8 278 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 FBXO15Q8NCQ5 510 aaPredicted RBP13.78□□□□□ -0.2
PTPRA-201ENST00000216877 OR5M9Q8NGP3 310 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 MS4A4EQ96PG1 132 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 FRG2BQ96QU4 278 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 FNDC11Q9BVV2 318 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
PTPRA-201ENST00000216877 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 SERPIND1P05546 499 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 BCHEP06276 602 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF7P17097 686 aaPredicted RBP13.78□□□□□ -0.2
PTPRA-201ENST00000216877 PCGF2P35227 344 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 GIPRP48546 466 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 CASP6P55212 293 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 SNRPGP62308 76 aaKnown RBP13.78□□□□□ -0.2
PTPRA-201ENST00000216877 PRR5P85299 388 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 KRBOX4Q5JUW0 171 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 OAFQ86UD1 273 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 GOT1L1Q8NHS2 421 aaPredicted RBP13.78□□□□□ -0.2
PTPRA-201ENST00000216877 SLC25A28Q96A46 364 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 SSX3Q99909 188 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 RDH14Q9HBH5 336 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 DZANK1Q9NVP4 752 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 ADAP00813 363 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 NQO2P16083 231 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 ACER2Q5QJU3 275 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 MEGF10Q96KG7 1140 aa13.78□□□□□ -0.2
PTPRA-201ENST00000216877 SOSTQ9BQB4 213 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms