RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 GDF7Q7Z4P5 450 aa27.61■■■□□ 2.01
PABPN1-201ENST00000216727 TBC1D15Q8TC07 691 aa27.61■■■□□ 2.01
PABPN1-201ENST00000216727 RBM18Q96H35 190 aaKnown RBP27.61■■■□□ 2.01
PABPN1-201ENST00000216727 CRELD1Q96HD1 420 aa27.61■■■□□ 2.01
PABPN1-201ENST00000216727 FBXO34Q9NWN3 711 aa27.61■■■□□ 2.01
PABPN1-201ENST00000216727 KCNE5Q9UJ90 142 aa27.61■■■□□ 2.01
PABPN1-201ENST00000216727 RNF215Q9Y6U7 377 aa27.61■■■□□ 2.01
PABPN1-201ENST00000216727 TGFBR3LH3BV60 316 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 THY1P04216 161 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 NR4A1P22736 598 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 TGFBR2P37173 567 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 STT3AP46977 705 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 OMPP47874 163 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 EMP3P54852 163 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 OCLNQ16625 522 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 WDR45BQ5MNZ6 344 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 RRM2BQ7LG56 351 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 PRICKLE2Q7Z3G6 844 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 RANBP3LQ86VV4 465 aaPredicted RBP27.6■■■□□ 2.01
PABPN1-201ENST00000216727 PIGXQ8TBF5 258 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 RIT1Q92963 219 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 PRTFDC1Q9NRG1 225 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 LRIT1Q9P2V4 623 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 BNIP3Q12983 259 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 GINS1Q14691 196 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 CARFQ8N187 725 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 SH3GL3Q99963 347 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP27.6■■■□□ 2.012e-8■□□□□ 10.9
PABPN1-201ENST00000216727 CLDN16Q9Y5I7 305 aa27.6■■■□□ 2.01
PABPN1-201ENST00000216727 EML5Q05BV3 1969 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 CDHR4A6H8M9 788 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 H0YIG0 161 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 MAT1AQ00266 395 aaKnown RBP27.59■■■□□ 2.01
PABPN1-201ENST00000216727 PLAG1Q6DJT9 500 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 RASSF6Q6ZTQ3 369 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 KIF18BQ86Y91 864 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 NKAIN4Q8IVV8 208 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 FAM26EQ8N5C1 309 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 ALOXE3Q9BYJ1 711 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 IRAK4Q9NWZ3 460 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 NTNG1Q9Y2I2 539 aa27.59■■■□□ 2.01
PABPN1-201ENST00000216727 GXYLT2A0PJZ3 443 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 ADORA3P0DMS8 318 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 CD36P16671 472 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 PCYT1AP49585 367 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 SMSP52788 366 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 MRPL2Q5T653 305 aaKnown RBP27.58■■■□□ 2.01
PABPN1-201ENST00000216727 NKAIN2Q5VXU1 208 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 FIGNL1Q6PIW4 674 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 TCEANCQ8N8B7 351 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 EVA1AQ9H8M9 152 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 ENAMQ9NRM1 1142 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 M0R082 166 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 PEX12O00623 359 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 ZNF749O43361 778 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 NUDT21O43809 227 aaKnown RBP27.58■■■□□ 2.01
PABPN1-201ENST00000216727 KCNK2O95069 426 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 EMDP50402 254 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 HSD17B7P56937 341 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 EFNB1P98172 346 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 PSG6Q00889 435 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 GRM7Q14831 915 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 ZNHIT3Q15649 155 aaPredicted RBP27.58■■■□□ 2.01
PABPN1-201ENST00000216727 TIGD6Q17RP2 521 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 MFSD4BQ5TF39 518 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 MEDAGQ5VYS4 303 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 MBOAT2Q6ZWT7 520 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 UBALD2Q8IYN6 164 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 IQCF1Q8N6M8 205 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 MMABQ96EY8 250 aaPredicted RBP27.58■■■□□ 2.01
PABPN1-201ENST00000216727 ARMC7Q9H6L4 198 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 ERVMER34-1Q9H9K5 563 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 FOLH1BQ9HBA9 442 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 TVP23BQ9NYZ1 205 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 SIT1Q9Y3P8 196 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 CSNK1G3Q9Y6M4 447 aa27.58■■■□□ 2.01
PABPN1-201ENST00000216727 SPTBP11277 2137 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 FMO6PO60774 539 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 FPR3P25089 353 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 Q7L0L9 218 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 MRGPREQ86SM8 312 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 RPL36Q9Y3U8 105 aaKnown RBP27.57■■■□□ 2
PABPN1-201ENST00000216727 LIPAP38571 399 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 SYT16Q17RD7 645 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 ACSM5Q6NUN0 579 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 TEX47Q8TBZ9 253 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 FAM46AQ96IP4 442 aaKnown RBP27.57■■■□□ 2
PABPN1-201ENST00000216727 ZNF578Q96N58 590 aaPredicted RBP27.57■■■□□ 2
PABPN1-201ENST00000216727 DGAT2Q96PD7 388 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 PLA2G12AQ9BZM1 189 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 SPRTNQ9H040 489 aaPredicted RBP27.57■■■□□ 2
PABPN1-201ENST00000216727 DNAJC27Q9NZQ0 273 aa27.57■■■□□ 2
PABPN1-201ENST00000216727 KLF4O43474 513 aa27.56■■■□□ 2
PABPN1-201ENST00000216727 CNOT3O75175 753 aaKnown RBP27.56■■■□□ 2
PABPN1-201ENST00000216727 CDC123O75794 336 aaPredicted RBP27.56■■■□□ 2
PABPN1-201ENST00000216727 CLPXO76031 633 aa27.56■■■□□ 2
PABPN1-201ENST00000216727 PTHP01270 115 aa27.56■■■□□ 2
PABPN1-201ENST00000216727 DCNP07585 359 aaKnown RBP27.56■■■□□ 2
PABPN1-201ENST00000216727 AHCYL2Q96HN2 611 aaKnown RBP27.56■■■□□ 2
PABPN1-201ENST00000216727 VSTM2LQ96N03 204 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms