RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 JUNP05412 331 aaKnown RBP16.7■□□□□ 0.26
CLN6-220ENST00000637450 FOSL1P15407 271 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 EVI2BP34910 448 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 NCBP2P52298 156 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLN6-220ENST00000637450 ZNF155Q12901 538 aaPredicted RBP16.7■□□□□ 0.26
CLN6-220ENST00000637450 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 CYP27C1Q4G0S4 372 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 CCNYL1Q8N7R7 359 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 OR4K17Q8NGC6 315 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 MZB1Q8WU39 189 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 PPP4R1LQ9P1A2 415 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 PSMC3IPQ9P2W1 217 aaPredicted RBP16.7■□□□□ 0.26
CLN6-220ENST00000637450 DCDC2Q9UHG0 476 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 EMCNQ9ULC0 261 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 GRID1Q9ULK0 1009 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 WBP11Q9Y2W2 641 aaKnown RBP16.7■□□□□ 0.26
CLN6-220ENST00000637450 A0A1W2PPR1 153 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 UPK1AO00322 258 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 PSMG1O95456 288 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 CRHP06850 196 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 PEPDP12955 493 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 TCEA1P23193 301 aaKnown RBP16.69■□□□□ 0.26
CLN6-220ENST00000637450 MC3RP41968 323 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 CLDN15P56746 228 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 TRIM46Q7Z4K8 759 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 IFT20Q8IY31 132 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 OR2L13Q8N349 312 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 OR2M3Q8NG83 312 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 FAM76AQ8TAV0 307 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 STARD4Q96DR4 205 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 CCDC126Q96EE4 140 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 TXLNGYQ9BZA5 131 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 GLIPR2Q9H4G4 154 aa16.69■□□□□ 0.26
CLN6-220ENST00000637450 FLNAP21333 2647 aaKnown RBP16.68■□□□□ 0.26
CLN6-220ENST00000637450 MSTNO14793 375 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 CASKO14936 926 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 SCO2O43819 266 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 FAM153BP0C7A2 387 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 PCYT1AP49585 367 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 POU4F3Q15319 338 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 DECR1Q16698 335 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 FAM153CQ494X1 144 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 SH2D4BQ5SQS7 431 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 OR2A2Q6IF42 318 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 TMEM107Q6UX40 140 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 CHMP1BQ7LBR1 199 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 P4HA3Q7Z4N8 544 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 CDC26Q8NHZ8 85 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 RTN4RQ9BZR6 473 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 GSX1Q9H4S2 264 aaPredicted RBP16.68■□□□□ 0.26
CLN6-220ENST00000637450 MYNNQ9NPC7 610 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 MIEF1Q9NQG6 463 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 SDHAF3Q9NRP4 125 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 FLRT3Q9NZU0 649 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 MED11Q9P086 117 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 NDRG3Q9UGV2 375 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 TBK1Q9UHD2 729 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 ABCG2Q9UNQ0 655 aa16.68■□□□□ 0.26
CLN6-220ENST00000637450 NAV3Q8IVL0 2385 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 A0A1W2PPM1 405 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 SLC22A20A6NK97 555 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 H3BQF6 201 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 LINC01387J3KSC0 135 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 MYL2P10916 166 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 HOXB4P17483 251 aaPredicted RBP16.67■□□□□ 0.26
CLN6-220ENST00000637450 HK1P19367 917 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 CD53P19397 219 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 HOXC12P31275 282 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 EEFSECP57772 596 aaKnown RBP16.67■□□□□ 0.26
CLN6-220ENST00000637450 NAA20P61599 178 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 FAM27E3Q08E93 113 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
CLN6-220ENST00000637450 IMPG1Q17R60 797 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 ZYG11AQ6WRX3 759 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 SH2D5Q6ZV89 423 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 MEIOBQ8N635 442 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 WFDC11Q8NEX6 87 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 ELP4Q96EB1 424 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 AMDHD1Q96NU7 426 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 DDX18Q9NVP1 670 aaKnown RBP16.67■□□□□ 0.26
CLN6-220ENST00000637450 FAM120CQ9NX05 1096 aaKnown RBP16.67■□□□□ 0.26
CLN6-220ENST00000637450 ZNF337Q9Y3M9 751 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 TESMINQ9Y4I5 508 aa16.67■□□□□ 0.26
CLN6-220ENST00000637450 POLR3HQ9Y535 204 aaPredicted RBP16.67■□□□□ 0.26
CLN6-220ENST00000637450 H0YC42 278 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 TNFRSF21O75509 655 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 RSL1D1O76021 490 aaKnown RBP16.66■□□□□ 0.26
CLN6-220ENST00000637450 IL33O95760 270 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 NTSP30990 170 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 KIR2DL2P43627 348 aaPredicted RBP16.66■□□□□ 0.26
CLN6-220ENST00000637450 SUCLG1P53597 346 aaKnown RBP16.66■□□□□ 0.26
CLN6-220ENST00000637450 TPD52P55327 224 aaPredicted RBP16.66■□□□□ 0.26
CLN6-220ENST00000637450 RAET1LQ5VY80 246 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 NOXRED1Q6NXP6 359 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 FRMD7Q6ZUT3 714 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 IKBIPQ70UQ0 350 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 CNEP1R1Q8N9A8 125 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms