RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ZNF23P17027 643 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 ZNF26P17031 533 aaPredicted RBP14.24□□□□□ -0.13
CLN6-219ENST00000637329 ITIH1P19827 911 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 CSRP1P21291 193 aaKnown RBP14.24□□□□□ -0.13
CLN6-219ENST00000637329 GABRA3P34903 492 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 PIGAP37287 484 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 CHRNEQ04844 493 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 NCF4Q15080 339 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 DUSP7Q16829 419 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 LIN52Q52LA3 116 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 TMEM205Q6UW68 189 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 NPSR1Q6W5P4 371 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 ZBTB49Q6ZSB9 765 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 LAPTM4BQ86VI4 370 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 HIPK1Q86Z02 1210 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 ZDHHC13Q8IUH4 622 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 PRSS58Q8IYP2 241 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 C17orf47Q8NEP4 570 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 OR1N1Q8NGS0 311 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 OR5K1Q8NHB7 308 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 WDR36Q8NI36 951 aaKnown RBP14.24□□□□□ -0.13
CLN6-219ENST00000637329 ZNF721Q8TF20 911 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 NR4A3Q92570 626 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 TMBIM1Q969X1 311 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 NRBF2Q96F24 287 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 ZNF300Q96RE9 604 aaPredicted RBP14.24□□□□□ -0.13
CLN6-219ENST00000637329 ITPAQ9BY32 194 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 FAM117AQ9C073 453 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 GABARAPL1Q9H0R8 117 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 SOX17Q9H6I2 414 aaPredicted RBP14.24□□□□□ -0.13
CLN6-219ENST00000637329 NDUFAF4Q9P032 175 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 C3orf18Q9UK00 162 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 PCDHGA10Q9Y5H3 936 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 B3GALT1Q9Y5Z6 326 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 ENPP4Q9Y6X5 453 aa14.24□□□□□ -0.13
CLN6-219ENST00000637329 FRG2CA6NGY1 282 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 AGAP5A6NIR3 686 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 C1QTNF9BB2RNN3 333 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ACOX3O15254 700 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CNOT3O75175 753 aaKnown RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 STK17BO94768 372 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ZIC2O95409 532 aaPredicted RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 LGI1O95970 557 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 DBIP07108 87 aaKnown RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 C1QTNF9P0C862 333 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CT45A8P0DMV1 189 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CT45A9P0DMV2 189 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 RHCEP18577 417 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ATP6V1C1P21283 382 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 LCN1P31025 176 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ETV5P41161 510 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 PPICP45877 212 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 EMP2P54851 167 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 PSMD4P55036 377 aaKnown RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 AQP4P55087 323 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 LARS2Q15031 903 aaKnown RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLN6-219ENST00000637329 ZSWIM7Q19AV6 140 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CYP27C1Q4G0S4 372 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 SFT2D3Q587I9 215 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CT45A2Q5DJT8 189 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ZNF311Q5JNZ3 666 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 TMEM164Q5U3C3 297 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 RNF220Q5VTB9 566 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 SHQ1Q6PI26 577 aaKnown RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 DHRS13Q6UX07 377 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 LANCL3Q6ZV70 420 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CYP4Z1Q86W10 505 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 DEFB124Q8NES8 71 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 DOK4Q8TEW6 326 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 PIK3R3Q92569 461 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 MR1Q95460 341 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 PMEPA1Q969W9 287 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ZNF597Q96LX8 424 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 EPYCQ99645 322 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 SEMA4CQ9C0C4 833 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 OR8D2Q9GZM6 311 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 COQ10BQ9H8M1 238 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 REEP1Q9H902 201 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 KLHL28Q9NXS3 571 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 PISDQ9UG56 409 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 SLC13A4Q9UKG4 626 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 LHX6Q9UPM6 363 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 ZNF443Q9Y2A4 671 aaPredicted RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 DTX4Q9Y2E6 619 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 GPR55Q9Y2T6 319 aaPredicted RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 SH3GLB1Q9Y371 365 aa14.23□□□□□ -0.13
CLN6-219ENST00000637329 CNOT1A5YKK6 2376 aaKnown RBP14.23□□□□□ -0.13
CLN6-219ENST00000637329 ZZEF1O43149 2961 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 G3V2T6 193 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 NME6O75414 186 aaPredicted RBP14.22□□□□□ -0.13
CLN6-219ENST00000637329 E2F6O75461 281 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 FPR1P21462 350 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 DRD5P21918 477 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 DNAJA1P31689 397 aaKnown RBP14.22□□□□□ -0.13
CLN6-219ENST00000637329 DCTP40126 519 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 ARHGDIAP52565 204 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 EBPQ15125 230 aaKnown RBP14.22□□□□□ -0.13
CLN6-219ENST00000637329 NRF1Q16656 503 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms