RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 OR51V1Q9H2C8 321 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 TRIM45Q9H8W5 580 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ZSCAN32Q9NX65 697 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 GNB5O14775 395 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 VEGFDO43915 354 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 UBXN7O94888 489 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PRG2P13727 222 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC1A3P43003 542 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 KHKP50053 298 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 CDK5Q00535 292 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PLK5Q496M5 336 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ENTPD8Q5MY95 495 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC36A4Q6YBV0 504 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF438Q7Z4V0 828 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 LILRB4Q8NHJ6 448 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC7A6Q92536 515 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 CHFRQ96EP1 664 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PPP1R16AQ96I34 528 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 FUZQ9BT04 418 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 HDHD2Q9H0R4 259 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 WDR26Q9H7D7 661 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 RNF121Q9H920 327 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 POLMQ9NP87 494 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ATP13A2Q9NQ11 1180 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ZFR2Q9UPR6 939 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 MRPS7Q9Y2R9 242 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 A0A0A6YYD5 115 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 ALPPP05187 535 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 EIF2S1P05198 315 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 HIST1H1TP22492 207 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 KLHL22Q53GT1 634 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 TMEM31Q5JXX7 168 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 C1orf94Q6P1W5 598 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 ZC3H14Q6PJT7 736 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 FAM111BQ6SJ93 734 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 RPTNQ6XPR3 784 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 GET4Q7L5D6 327 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 YIPF7Q8N8F6 280 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 OR52E1Q8NGJ3 308 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 CDS1Q92903 461 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 MCHR1Q99705 422 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 OR2B2Q9GZK3 357 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC38A1Q9H2H9 487 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 PRSS16Q9NQE7 514 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 GSTK1Q9Y2Q3 226 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC9A3R1O14745 358 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 PAHP00439 452 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 IL1AP01583 271 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 ASGR2P07307 311 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 DDX5P17844 614 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 TBXA2RP21731 343 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 GAS1P54826 345 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 SIRT6Q8N6T7 355 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 RASSF5Q8WWW0 418 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 MS4A6EQ96DS6 147 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 FAIM2Q9BWQ8 316 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC6A20Q9NP91 592 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 H2AFY2Q9P0M6 372 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 ACAD8Q9UKU7 415 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 TRAPPC4Q9Y296 219 aa13.14□□□□□ -0.31
CACNA1A-228ENST00000636610 IQCMA0A1B0GVH7 501 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 BTN3A3O00478 584 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 THY1P04216 161 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 AK4P27144 223 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ADAMTS15Q8TE58 950 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 LINC00615Q96LM1 132 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 HCAR1Q9BXC0 346 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ADAP2Q9NPF8 381 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 TRPV5Q9NQA5 729 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 GIMAP4Q9NUV9 329 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 FBXO34Q9NWN3 711 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 APOBEC3BQ9UH17 382 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 DPP7Q9UHL4 492 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ITGB1BP2Q9UKP3 347 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 SIRT4Q9Y6E7 314 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 GABRPO00591 440 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 CLUP10909 449 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 OR10A3P58181 314 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 FGL2Q14314 439 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 IRF4Q15306 451 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 DEFB134Q4QY38 66 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 THOC7Q6I9Y2 204 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms