RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ZNF385BQ569K4 471 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 SZRD1Q7Z422 152 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 R3HCC1LQ7Z5L2 792 aaKnown RBP16.74■□□□□ 0.27
CLN6-214ENST00000636314 YRDCQ86U90 279 aaKnown RBP16.74■□□□□ 0.27
CLN6-214ENST00000636314 TIMP4Q99727 224 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 SSU72Q9NP77 194 aaKnown RBP16.74■□□□□ 0.27
CLN6-214ENST00000636314 EQTNQ9NQ60 294 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 GIMAP2Q9UG22 337 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 KCNN3Q9UGI6 736 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 ZDHHC2Q9UIJ5 367 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 CBLCQ9ULV8 474 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 ZNF469Q96JG9 3925 aaPredicted RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 A0A0G2JNJ9 132 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 WDR91A4D1P6 747 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 TM9SF1O15321 606 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 CBR3O75828 277 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 ZWINTO95229 277 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 HSPA4LO95757 839 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 CYP4B1P13584 511 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 ZFP36L2P47974 494 aaKnown RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 MANFP55145 182 aaKnown RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 DECR1Q16698 335 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 CYP27C1Q4G0S4 372 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 ACSF3Q4G176 576 aaPredicted RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 NHSL2Q5HYW2 709 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 VASNQ6EMK4 673 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 WDR53Q7Z5U6 358 aaPredicted RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 CROCCP2Q86T23 111 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 EXOC3L1Q86VI1 746 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 PLCZ1Q86YW0 608 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 WDSUB1Q8N9V3 476 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 OR6Y1Q8NGX8 325 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 OR14L1PQ8NHC6 308 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 MTERF3Q96E29 417 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 ZIM3Q96PE6 472 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 LMF2Q9BU23 707 aaKnown RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 UGT2B28Q9BY64 529 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 PRDM14Q9GZV8 571 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 Q9UFV3 132 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 MRTO4Q9UKD2 239 aaKnown RBP16.73■□□□□ 0.27
CLN6-214ENST00000636314 CAMK2AQ9UQM7 478 aa16.73■□□□□ 0.27
CLN6-214ENST00000636314 NAV3Q8IVL0 2385 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 AHRRA9YTQ3 701 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 SCO2O43819 266 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 SERPINE1P05121 402 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 MYZAPP0CAP1 466 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 BMP7P18075 431 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 GRK2P25098 689 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 EVI2BP34910 448 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 RPL3P39023 403 aaKnown RBP16.72■□□□□ 0.27
CLN6-214ENST00000636314 ADH7P40394 386 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 FRKP42685 505 aaPredicted RBP16.72■□□□□ 0.27
CLN6-214ENST00000636314 RFX3P48380 749 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 IST1P53990 364 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 PSMD4P55036 377 aaKnown RBP16.72■□□□□ 0.27
CLN6-214ENST00000636314 SF3B4Q15427 424 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLN6-214ENST00000636314 CHI3L2Q15782 390 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 RIPPLY2Q5TAB7 128 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 LRIG3Q6UXM1 1119 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 FNDC5Q8NAU1 212 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 RNF138Q8WVD3 245 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 ABTB1Q969K4 478 aaPredicted RBP16.72■□□□□ 0.27
CLN6-214ENST00000636314 C3orf30Q96M34 536 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 C1orf50Q9BV19 199 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 TMUB1Q9BVT8 246 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 OR2B2Q9GZK3 357 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 C3orf14Q9HBI5 128 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 ACSS1Q9NUB1 689 aaPredicted RBP16.72■□□□□ 0.27
CLN6-214ENST00000636314 DKKL1Q9UK85 242 aa16.72■□□□□ 0.27
CLN6-214ENST00000636314 TTC36A6NLP5 189 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 SCAMP2O15127 329 aaKnown RBP16.71■□□□□ 0.27
CLN6-214ENST00000636314 BIRC5O15392 142 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 LYPLA1O75608 230 aaPredicted RBP16.71■□□□□ 0.27
CLN6-214ENST00000636314 ACTL6AO96019 429 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 PRPS2P11908 318 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 PRKAG1P54619 331 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 GAB1Q13480 694 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 VPS26BQ4G0F5 336 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 C6orf136Q5SQH8 315 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 DCST1Q5T197 706 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 IFNEQ86WN2 208 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 LACC1Q8IV20 430 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 OR4K17Q8NGC6 315 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 ZBTB9Q96C00 473 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 TUBGCP3Q96CW5 907 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 MS4A4EQ96PG1 132 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 TAS2R10Q9NYW0 307 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 PPP4R1LQ9P1A2 415 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 FBXL2Q9UKC9 423 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 ABCG2Q9UNQ0 655 aa16.71■□□□□ 0.27
CLN6-214ENST00000636314 PRRC2AP48634 2157 aaKnown RBP16.71■□□□□ 0.27
CLN6-214ENST00000636314 HSPB2A8KAH6 182 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 KCNH1O95259 989 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 IL33O95760 270 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 EFNA1P20827 205 aaPredicted RBP16.7■□□□□ 0.26
CLN6-214ENST00000636314 SRD5A2P31213 254 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 GABRA3P34903 492 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 PTGR1Q14914 329 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 HSPB2Q16082 182 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms