RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 TOMM40LQ969M1 308 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 EIF5A2Q9GZV4 153 aaKnown RBP15.24■□□□□ 0.03
CLN5-208ENST00000636183 ARRDC1-AS1Q9H2J1 176 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 TMEM100Q9NV29 134 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 PCTPQ9UKL6 214 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 A6NHS1 94 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 UBL4AP11441 157 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 PYCR1P32322 319 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 PITX1P78337 314 aaPredicted RBP15.24■□□□□ 0.03
CLN5-208ENST00000636183 ADAM17P78536 824 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 PLA2G7Q13093 441 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 FAM78AQ5JUQ0 283 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 ARHGAP11AQ6P4F7 1023 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 ADOQ96SZ5 270 aa15.24■□□□□ 0.03
CLN5-208ENST00000636183 RANBP3Q9H6Z4 567 aaPredicted RBP15.24■□□□□ 0.03
CLN5-208ENST00000636183 TVP23AA6NH52 213 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 LRRTM2O43300 516 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 FPR1P21462 350 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 NOVA1P51513 510 aaKnown RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 ARL16Q0P5N6 197 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 HYAL4Q2M3T9 481 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 OR2T4Q8NH00 348 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 AMDHD1Q96NU7 426 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 LRRN3Q9H3W5 708 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 POT1Q9NUX5 634 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 KIR2DS5A0A0G2JLQ3 304 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 A0A0G2JNG1 304 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 KIR2DS3K7RE56 304 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 PRICKLE3O43900 615 aaPredicted RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 KIR2DS5Q14953 304 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 CUTCQ9NTM9 273 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 KCND3Q9UK17 655 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 hCG_1809904A0A1W2PP81 198 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 A0A1W2PPE2 198 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 A0A1W2PR64 198 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 A0A1W2PRV1 198 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 MC3RP41968 323 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 SLC18A1P54219 525 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 MAT1AQ00266 395 aaKnown RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 OR5H2Q8NGV7 314 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 OR10A5Q9H207 317 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 OR10A2Q9H208 303 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 DCSTAMPQ9H295 470 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 PAK1IP1Q9NWT1 392 aaPredicted RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 RHBDD3Q9Y3P4 386 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 FAM159BA6NKW6 160 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 HTRA2O43464 458 aaPredicted RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 SEC61A1P61619 476 aaKnown RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 SCAPQ12770 1279 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 PTGR1Q14914 329 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 PPP1R3AQ16821 1122 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 KLHL9Q9P2J3 617 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 S100PP25815 95 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 RHDQ02161 417 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 LRRC57Q8N9N7 239 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 TMEM178AQ8NBL3 297 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 OR52R1Q8NGF1 315 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 IMP4Q96G21 291 aaKnown RBP15.23■□□□□ 0.03
CLN5-208ENST00000636183 KCND1Q9NSA2 647 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 PLEKHJ1Q9NW61 149 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 ENTPD2Q9Y5L3 495 aa15.23■□□□□ 0.03
CLN5-208ENST00000636183 NPR2P20594 1047 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 MRPS21P82921 87 aaKnown RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 TANGO2Q6ICL3 276 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 KLBQ86Z14 1044 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 ZNF695Q8IW36 515 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 PAPD5Q8NDF8 572 aaKnown RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 CSNK2A3Q8NEV1 391 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 C16orf78Q8WTQ4 265 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 COQ4Q9Y3A0 265 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 LOC102725191A0A1B0GVB3 256 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 PTGER1P34995 402 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 CDK3Q00526 305 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 RAB31Q13636 194 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 MEP1AQ16819 746 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 RPS26P11Q5JNZ5 115 aaPredicted RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 LIPKQ5VXJ0 399 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 SLC39A11Q8N1S5 342 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 CHPT1Q8WUD6 406 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 SLC41A3Q96GZ6 507 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 GMEB1Q9Y692 573 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 A0A1W2PP18 115 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 FAAHO00519 579 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 KNG1P01042 644 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 RAB11BQ15907 218 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 BCL2A1Q16548 175 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 STT3BQ8TCJ2 826 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 SLC6A16Q9GZN6 736 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 POLHQ9Y253 713 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 NOSIPQ9Y314 301 aaKnown RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 ZNF891A8MT65 544 aaPredicted RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 ZIC2O95409 532 aaPredicted RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 SSR4P51571 173 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 AGFG1P52594 562 aaKnown RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 USF2Q15853 346 aaPredicted RBP15.22■□□□□ 0.03
CLN5-208ENST00000636183 MAMDC4Q6UXC1 1216 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 SLC46A3Q7Z3Q1 461 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms