RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 UQCRC2P22695 453 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 KHKP50053 298 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ST13P50502 369 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 PSMD4P55036 377 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CDC42P60953 191 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZZZ3Q8IYH5 903 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 NT5CQ8TCD5 201 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 KLHL6Q8WZ60 621 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 WASHC1A8K0Z3 465 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC16A6O15403 523 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 RYKP34925 604 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 BSGP35613 385 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CLK1P49759 484 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 KCNAB2Q13303 367 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 EXOSC7Q15024 291 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 GPR68Q15743 365 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 FGD3Q5JSP0 725 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF691Q5VV52 312 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 GALNT18Q6P9A2 607 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ARHGAP22Q7Z5H3 698 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 RNF130Q86XS8 419 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CA13Q8N1Q1 262 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CREB3L4Q8TEY5 395 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 DDX31Q9H8H2 851 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ETAA1Q9NY74 926 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 ABCG2Q9UNQ0 655 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CACNA1BQ00975 2339 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 FANCMQ8IYD8 2048 aa11.64□□□□□ -0.55
SYNGAP1-207ENST00000628646 CTNSO60931 367 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 GCM2O75603 506 aaPredicted RBP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 BCL10O95999 233 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCKBRP32239 447 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 GABRA3P34903 492 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 FAM69BQ5VUD6 431 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 RHBDD2Q6NTF9 364 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCDC81Q6ZN84 652 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 AMER3Q8N944 861 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 PIK3C3Q8NEB9 887 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 GEMIN6Q8WXD5 167 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 WDR34Q96EX3 536 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 LYRM4Q9HD34 91 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 TBC1D23Q9NUY8 699 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 EMC8O43402 210 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 RORAP35398 523 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 RPS18P62269 152 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 CD47Q08722 323 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 ABHD17BQ5VST6 288 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 SPARTQ8N0X7 666 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 STX19Q8N4C7 294 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 HDAC2Q92769 488 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 MYDGFQ969H8 173 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZBTB20Q9HC78 741 aaPredicted RBP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRDM9Q9NQV7 894 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 GIN1Q9NXP7 522 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 hCG_2039718K7EN88 272 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 CTSBP07858 339 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 MC2RQ01718 297 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 DECR1Q16698 335 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 FAM111BQ6SJ93 734 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 HSDL2Q6YN16 418 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 C10orf53Q8N6V4 93 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR52N2Q8NGI0 321 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR5L2Q8NGL0 311 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 PLEKHA8Q96JA3 519 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 LHX9Q9NQ69 397 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRDM7Q9NQW5 492 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 SEC14L3Q9UDX4 400 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 SCN2AQ99250 2005 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 HCRTR1O43613 425 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC34A2O95436 690 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 COPZ1P61923 177 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 MEP1AQ16819 746 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF793Q6ZN11 406 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 HSH2DQ96JZ2 352 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 LHPPQ9H008 270 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCDC86Q9H6F5 360 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 GPATCH2Q9NW75 528 aa11.63□□□□□ -0.55
SYNGAP1-207ENST00000628646 B4E171 279 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ANGPTL1O95841 491 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 POU1F1P28069 291 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 TSPAN7P41732 249 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 NR0B1P51843 470 aaKnown RBP11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 MVDP53602 400 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 MLLT10P55197 1068 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 HSD17B7P56937 341 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 LTB4RQ15722 352 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 C6orf141Q5SZD1 244 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 CASP12Q6UXS9 341 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC16A12Q6ZSM3 486 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 C6orf120Q7Z4R8 191 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 CAMKMTQ7Z624 323 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 C17orf82Q86X59 251 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ARMC8Q8IUR7 673 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLITRK4Q8IW52 837 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 C7orf57Q8NEG2 295 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 TBC1D15Q8TC07 691 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms