RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 FAM83FQ8NEG4 500 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 TMCO6Q96DC7 493 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 ELP4Q96EB1 424 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 TREX2Q9BQ50 279 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 ZNF395Q9H8N7 513 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 KCNJ16Q9NPI9 418 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 SERHLQ9NQF3 203 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 PNPOQ9NVS9 261 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 MARCOQ9UEW3 520 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 BAIAP2L1Q9UHR4 511 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 PDZD2O15018 2839 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 KIAA1549Q9HCM3 1950 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 PIP5K1BO14986 540 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 HDAC3O15379 428 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 AKAP10O43572 662 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 ABCB7O75027 752 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 COQ9O75208 318 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 SLITRK5O94991 958 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 PSMG1O95456 288 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 IGFBP2P18065 325 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 BMP7P18075 431 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 ZFP36L2P47974 494 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 PNLIPRP2P54317 469 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 RPL38P63173 70 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 OCRLQ01968 901 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 ZNF155Q12901 538 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 ZNF385BQ569K4 471 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 NHSL2Q5HYW2 709 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 DCST1Q5T197 706 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 ZNF551Q7Z340 670 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 WDR53Q7Z5U6 358 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 MTERF4Q7Z6M4 381 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 OR2L13Q8N349 312 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 CLHC1Q8NHS4 586 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 CIDECQ96AQ7 238 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 EFHD2Q96C19 240 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 TUBGCP3Q96CW5 907 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 PPP3R2Q96LZ3 170 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 TSSK3Q96PN8 268 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 SORT1Q99523 831 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 UGT2B28Q9BY64 529 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 NSRP1Q9H0G5 558 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 OR10H1Q9Y4A9 318 aa16.36■□□□□ 0.21
SCAMP4-213ENST00000621748 AHRRA9YTQ3 701 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 CBR3O75828 277 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 MAPK1P28482 360 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 IL12BP29460 328 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 KRT20P35900 424 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 WNT3P56703 355 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 GAB1Q13480 694 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 EFR3AQ14156 821 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 GALNTL6Q49A17 601 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 ACSF3Q4G176 576 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 ATP6AP1LQ52LC2 224 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 RIPPLY2Q5TAB7 128 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 RNF138Q8WVD3 245 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 WDYHV1Q96HA8 205 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 PRDM14Q9GZV8 571 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 REEP4Q9H6H4 257 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 DDX18Q9NVP1 670 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 GIMAP2Q9UG22 337 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 HAO1Q9UJM8 370 aa16.35■□□□□ 0.21
SCAMP4-213ENST00000621748 POLQO75417 2590 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 NUP214P35658 2090 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 C17orf51A8MQB3 221 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 B4DXG7 233 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 PDPK1O15530 556 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 EPPINO95925 133 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 BCKDHAP12694 445 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 CYP4B1P13584 511 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 MSX1P28360 303 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 GAS1P54826 345 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 GNGT1P63211 74 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 PSPHP78330 225 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 HSPB3Q12988 150 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 MAD2L1Q13257 205 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 PDE7AQ13946 482 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 NXNQ6DKJ4 435 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 OR5M10Q6IEU7 315 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 PLCZ1Q86YW0 608 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 ABTB1Q969K4 478 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 ZNF764Q96H86 408 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 PPP1R36Q96LQ0 422 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 NUF2Q9BZD4 464 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 C20orf27Q9GZN8 174 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 CCDC134Q9H6E4 229 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 SLCO1B3Q9NPD5 702 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 SH3BP4Q9P0V3 963 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 FBXL2Q9UKC9 423 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 CAMK2AQ9UQM7 478 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 TMED5Q9Y3A6 229 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 WIF1Q9Y5W5 379 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 DOCK7Q96N67 2140 aa16.34■□□□□ 0.21
SCAMP4-213ENST00000621748 TBX19O60806 448 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 EDF1O60869 148 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 TGDSO95455 350 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 CYP27C1Q4G0S4 372 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 XKR7Q5GH72 579 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 CES4AQ5XG92 561 aa16.33■□□□□ 0.2
SCAMP4-213ENST00000621748 CPLX4Q7Z7G2 160 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms