RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	ACER2	Q5QJU3	275 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ARHGAP11A	Q6P4F7	1023 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	DTX2	Q86UW9	622 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC22A16	Q86VW1	577 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	PDSS2	Q86YH6	399 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	DENND6A	Q8IWF6	608 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	C17orf78	Q8N4C9	275 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	FAM156A	Q8NDB6	213 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SUN3	Q8TAQ9	357 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	HTRA1	Q92743	480 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	GSTO2	Q9H4Y5	243 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	C12orf10	Q9HB07	376 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	OBP2B	Q9NPH6	170 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	MID2	Q9UJV3	735 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	FBXO5	Q9UKT4	447 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRPF19	Q9UMS4	504 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	IGSF10	Q6WRI0	2623 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	DOCK10	Q96BY6	2186 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	LOC105371267	A0A1B0GV96	52 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM82	A0PJX8	343 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CYSRT1	A8MQ03	144 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SDHD	O14521	159 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	UBFD1	O14562	309 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SEMA7A	O75326	666 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	COX6B1	P14854	86 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	IFNGR1	P15260	489 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	FMO4	P31512	558 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZFP36L2	P47974	494 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	BCAP31	P51572	246 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CTBP1	Q13363	440 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ACAP2	Q15057	778 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTPRR	Q15256	657 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	LSM12	Q3MHD2	195 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF542P	Q5EBM4	170 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ARL13A	Q5H913	290 aa	Predicted RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	HACD2	Q6Y1H2	254 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	MARCH9	Q86YJ5	346 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SYT14	Q8NB59	555 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR2M7	Q8NG81	312 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR5AR1	Q8NGP9	310 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	RP9	Q8TA86	221 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	JADE3	Q92613	823 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ADIPOR1	Q96A54	375 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SARAF	Q96BY9	339 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	TBC1D20	Q96BZ9	403 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	OMA1	Q96E52	524 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	MAGED4	Q96JG8	741 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	TM9SF2	Q99805	663 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	UTP23	Q9BRU9	249 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	PLEKHF2	Q9H8W4	249 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	IMP3	Q9NV31	184 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	NDUFA13	Q9P0J0	144 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	MRPS18B	Q9Y676	258 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDR87	Q6ZQQ6	2873 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	DNAH14	Q0VDD8	3507 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	DSPP	Q9NZW4	1301 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	JRK	O75564	520 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TSPAN9	O75954	239 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CLEC2L	P0C7M8	214 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC35E2	P0CK97	266 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SMIM18	P0DKX4	95 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TPH1	P17752	444 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	UGT1A6	P19224	532 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	UGT1A1	P22309	533 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	GFRA1	P56159	465 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ALDH6A1	Q02252	535 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	LRRC74A	Q0VAA2	488 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FGD3	Q5JSP0	725 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FAM151B	Q6UXP7	276 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CLYBL	Q8N0X4	340 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYO1H	Q8N1T3	1032 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ADPRHL1	Q8NDY3	354 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDR20	Q8TBZ3	569 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC5A11	Q8WWX8	675 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CMTM5	Q96DZ9	223 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	HDHD5	Q9BXW7	423 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	BEX2	Q9BXY8	128 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MRPL46	Q9H2W6	279 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PLSCR3	Q9NRY6	295 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	RASSF1	Q9NS23	344 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	COX16	Q9P0S2	106 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CES1P1	Q9UKY3	287 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	POMP	Q9Y244	141 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMED5	Q9Y3A6	229 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTRH2	Q9Y3E5	179 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SPEF1	Q9Y4P9	236 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	IGKV3D-15	A0A087WSY6	115 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR6C70	A6NIJ9	312 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CENPBD1	B2RD01	187 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CTAG2	O75638	210 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYO1D	O94832	1006 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FGF4	P08620	206 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MTHFD2	P13995	350 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF182	P17025	639 aa	Predicted RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTGDS	P41222	190 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms