RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 SMG9Q9H0W8 520 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 CNOT2Q9NZN8 540 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 GGT3PA6NGU5 568 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 CACNB4O00305 520 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 PRKNO60260 465 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 GGT2P36268 569 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 LIMK1P53667 647 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ACTA2P62736 377 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ACTG2P63267 376 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 SELENOWP63302 87 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ENPP7Q6UWV6 458 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RANBP3LQ86VV4 465 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 CMTM1Q8IZ96 169 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 DTWD1Q8N5C7 304 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 OR5AK2Q8NH90 309 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 WRAP53Q9BUR4 548 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 EBPLQ9BY08 206 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RPS10P5Q9NQ39 176 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 KLHL9Q9P2J3 617 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 PCDHB14Q9Y5E9 798 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 EIF2AK4Q9P2K8 1649 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 CPED1A4D0V7 1026 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 LGALS8O00214 317 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 SERPIND1P05546 499 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 MMP3P08254 477 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RSPO2Q6UXX9 243 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 MRPL41Q8IXM3 137 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 TRMT10AQ8TBZ6 339 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 CA5BP1Q8WTZ4 195 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 COQ8BQ96D53 544 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ZNF583Q96ND8 569 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 NIPSNAP3BQ9BS92 247 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 MRPL15Q9P015 296 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 PRAMEF4O60810 478 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 DRD2P14416 443 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 S100A11P31949 105 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 BMP8BP34820 402 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 CRISP1P54107 249 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 PSPHP78330 225 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RAB40BQ12829 278 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 MICAQ29983 383 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 PRAMEF9Q5VWM5 478 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 FRMPD2BQ6IN97 320 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 KIAA1211LQ6NV74 962 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 BMP8AQ7Z5Y6 402 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 TREX2Q9BQ50 279 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 PITHD1Q9GZP4 211 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEB-220ENST00000618972 ARL6Q9H0F7 186 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 LYARQ9NX58 379 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 CACNA1IQ9P0X4 2223 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ASPDHA6ND91 283 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 CAPN5O15484 640 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 PRICKLE3O43900 615 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 BCL2L1Q07817 233 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ELAVL2Q12926 359 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 OXA1LQ15070 435 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 MPPE1Q53F39 396 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 DDX53Q86TM3 631 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 WDR48Q8TAF3 677 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 KIAA1191Q96A73 305 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ZNF845Q96IR2 970 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 ALPK1Q96QP1 1244 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 SLC25A51Q9H1U9 297 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 SCML2Q9UQR0 700 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 C10orf71Q711Q0 1435 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ATP7AQ04656 1500 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 H3BMQ9 156 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RTCAO00442 366 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 SIGLEC5O15389 551 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RNF13O43567 381 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 CHRM2P08172 466 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 METTL15P1P0C7V9 234 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 TAS2R20P59543 309 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 SIGLEC14Q08ET2 396 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 CDONQ4KMG0 1287 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ZNF551Q7Z340 670 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 SERPINA11Q86U17 422 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 PARP16Q8N5Y8 322 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 PSMF1Q92530 271 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 RGMAQ96B86 450 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 FAM71F1Q96KD3 344 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 ZNF251Q9BRH9 671 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ZFP14Q9HCL3 533 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 EVA1BQ9NVM1 165 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 SIRT5Q9NXA8 310 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 TRAPPC4Q9Y296 219 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 DISP2A7MBM2 1401 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 LYRM1O43325 122 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 EBLN1P0CF75 366 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 FPR1P21462 350 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 CD52P31358 61 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 IFI44LQ53G44 452 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 MFSD14CQ5VZR4 134 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 NOTUMQ6P988 496 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 PARGQ86W56 976 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 ZNF629Q9UEG4 869 aaPredicted RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 ACOT7O00154 380 aa2.92□□□□□ -1.94
NEB-220ENST00000618972 POP4O95707 220 aaKnown RBP2.92□□□□□ -1.94
NEB-220ENST00000618972 RPL35P42766 123 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms