RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 UNC79Q9P2D8 2635 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CENPEQ02224 2701 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ZGRF1Q86YA3 2104 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 NCKAP5O14513 1909 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 GOLGA8QA0A0J9YX86 632 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 GXYLT2A0PJZ3 443 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 GOLGA8OA6NCC3 632 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 FAM166BA8MTA8 275 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 E9PBE3 544 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 GOLGA8NF8WBI6 632 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 REM1O75628 298 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 KCNK2O95069 426 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 EFNA1P20827 205 aaPredicted RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 GABRA3P34903 492 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 PTGS2P35354 604 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 CCT3P49368 545 aaKnown RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 PRIM2P49643 509 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 IDH3AP50213 366 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 PSMD4P55036 377 aaKnown RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 IRX1P78414 480 aaPredicted RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 PLGLB1Q02325 96 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 LRRC74AQ0VAA2 488 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SLC10A1Q14973 349 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 ZNHIT3Q15649 155 aaPredicted RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 DECR1Q16698 335 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SPANXN4Q5MJ08 99 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 ANXA8L1Q5VT79 327 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 C1QL3Q5VWW1 255 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 OR4F3Q6IEY1 312 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 PAOXQ6QHF9 649 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 APOOLQ6UXV4 268 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 WDR53Q7Z5U6 358 aaPredicted RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 PACS2Q86VP3 889 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 CLECL1Q8IZS7 167 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 FADS6Q8N9I5 356 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 OR56A1Q8NGH5 318 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 NEIL3Q8TAT5 605 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 PIK3R3Q92569 461 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 EFHD2Q96C19 240 aaPredicted RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 ZNF597Q96LX8 424 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 GNRHR2Q96P88 292 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 CCDC28BQ9BUN5 200 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 OSBPL11Q9BXB4 747 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 ACTRT3Q9BYD9 372 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 RTN4RQ9BZR6 473 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 DEFB127Q9H1M4 99 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SERHL2Q9H4I8 314 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 CCDC134Q9H6E4 229 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 GALNT9Q9HCQ5 603 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SLC52A3Q9NQ40 469 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SERHLQ9NQF3 203 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 ZCCHC3Q9NUD5 404 aaKnown RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 TMEM45AQ9NWC5 275 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 FAM120CQ9NX05 1096 aaKnown RBP7.53□□□□□ -1.2
NEK3-209ENST00000618856 ZIM2Q9NZV7 527 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SPRR3Q9UBC9 169 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 MEMO1Q9Y316 297 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 WIF1Q9Y5W5 379 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 SVILO95425 2214 aa7.53□□□□□ -1.2
NEK3-209ENST00000618856 NCOA6Q14686 2063 aaPredicted RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 ALG1L2C9J202 215 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 E9PLN8 166 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 NPIPB9F8W1W9 429 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 BCKDKO14874 412 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ZNHIT1O43257 154 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 EDF1O60869 148 aaKnown RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 SLC22A3O75751 556 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 CBR3O75828 277 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 AGFG2O95081 481 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 KCNH1O95259 989 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 IL6P05231 212 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 PGRP06401 933 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ALOX5P09917 674 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 HOXB9P17482 250 aaPredicted RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 AGAP20933 346 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 TBXA2RP21731 343 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 UQCRC2P22695 453 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 IL12BP29460 328 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 EVI2BP34910 448 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 KRT20P35900 424 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 PRKAG1P54619 331 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 GFRA1P56159 465 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 CRYZQ08257 329 aaKnown RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 LASP1Q14847 261 aaKnown RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 PGS1Q32NB8 556 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 FAM174BQ3ZCQ3 159 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 SAXO2Q658L1 398 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 VASNQ6EMK4 673 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 HEPHL1Q6MZM0 1159 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 MTFR2Q6P444 385 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 BHLHB9Q6PI77 547 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 MSANTD1Q6ZTZ1 278 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 C6orf120Q7Z4R8 191 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 PLCZ1Q86YW0 608 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 CHDHQ8NE62 594 aaPredicted RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 VPS37AQ8NEZ2 397 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 OR1J4Q8NGS1 313 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 OR4C3Q8NH37 302 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 NEURL3Q96EH8 262 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms