RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LOC100289279A0A1B0GTE1 492 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 GOLGA6L22H0YM25 854 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TMPRSS2O15393 492 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SSX4O60224 188 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PRAMEF4O60810 478 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PSMG1O95456 288 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SYNGR4O95473 234 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FAM58BPP0C7Q3 252 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 APEHP13798 732 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 PHC1P78364 1004 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ITGADQ13349 1161 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CRYMQ14894 314 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CR1LQ2VPA4 569 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CYP27C1Q4G0S4 372 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FBLN7Q53RD9 439 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PRAMEF9Q5VWM5 478 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 VASH1Q7L8A9 365 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 GALNT10Q86SR1 603 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 NUDT13Q86X67 352 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ADGRG3Q86Y34 549 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 MISPQ8IVT2 679 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SLC43A2Q8N370 569 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 OR4K14Q8NGD5 310 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 LRRC39Q96DD0 335 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SERPINI1Q99574 410 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SUCNR1Q9BXA5 334 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CACNG6Q9BXT2 260 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CISD1Q9NZ45 108 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 FBXL2Q9UKC9 423 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 VWA7Q9Y334 891 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SPEF1Q9Y4P9 236 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PCDHGA11Q9Y5H2 935 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 EPN1Q9Y6I3 576 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 FREM3P0C091 2139 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ABCA4P78363 2273 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 DNAJC13O75165 2243 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 A0A1W2PR48 441 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 B4DXG7 233 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 GOLGA6L19H0YKK7 550 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 J3QLI3 93 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 HSPA4LO95757 839 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CBX7O95931 251 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FSHBP01225 129 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CT62P0C5K7 136 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 HKR1P10072 659 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ETS1P14921 441 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PORP16435 677 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 CSNK2A2P19784 350 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 PIK3R1P27986 724 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SSTR4P31391 388 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 EMDP50402 254 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 RAC1P63000 192 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SIRPAP78324 504 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FOXL1Q12952 345 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PON3Q15166 354 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PPA1Q15181 289 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TAB1Q15750 504 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CYP1B1Q16678 543 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 AWAT1Q58HT5 328 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ZNF628Q5EBL2 1059 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 RBM20Q5T481 1227 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 TEDDM1Q5T9Z0 273 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SLC48A1Q6P1K1 146 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FIGNL1Q6PIW4 674 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 RAD9BQ6WBX8 426 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 WDR75Q8IWA0 830 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 AGGF1Q8N302 714 aaeCLIP4.05□□□□□ -1.76
SNCA-213ENST00000618500 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PPM1NQ8N819 430 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 FAM169BQ8N8A8 192 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 NAT8LQ8N9F0 302 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 OR4K17Q8NGC6 315 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 OR2V1Q8NHB1 315 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ZNF418Q8TF45 676 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 ATG4AQ8WYN0 398 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 KISS1RQ969F8 398 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 CPNE4Q96A23 557 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 VSTM2LQ96N03 204 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ITPAQ9BY32 194 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CD244Q9BZW8 370 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PIF1Q9H611 641 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 PTGES2Q9H7Z7 377 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 CTNNAL1Q9UBT7 734 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TMCO1Q9UM00 188 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 REXO2Q9Y3B8 237 aaKnown RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 PCDHA9Q9Y5H5 950 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 ACTL7BQ9Y614 415 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 A0A087WV62 115 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 C1orf226A1L170 272 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 OR2M5A3KFT3 312 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 GJE1A6NN92 205 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 E7EQL1 145 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 AHSGP02765 367 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 TFP02787 698 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SAT1P21673 171 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 IL32P24001 234 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 EVI2BP34910 448 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 KCNJ5P48544 419 aa4.05□□□□□ -1.76
SNCA-213ENST00000618500 SUMO3P55854 103 aaPredicted RBP4.05□□□□□ -1.76
SNCA-213ENST00000618500 BASP1P80723 227 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms