RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PTGDR2Q9Y5Y4 395 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 A8MV72 311 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 D6RAR5 112 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 BRINP1O60477 761 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GJB5O95377 273 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 MAS1P04201 325 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SYPP08247 313 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CBLP22681 906 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 HOXA9P31269 272 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ACVR1BP36896 505 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TAS2R20P59543 309 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 RPS26P62854 115 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 CYP27C1Q4G0S4 372 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ZNF648Q5T619 568 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 GPRIN1Q7Z2K8 1008 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TRIM46Q7Z4K8 759 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CMTM1Q8IZ96 169 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 METTL27Q8N6F8 245 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 CDRT4Q8N9R6 151 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FAM174AQ8TBP5 190 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 C22orf15Q8WYQ4 148 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TTTY10Q9BZA0 68 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FBRSL1Q9HCM7 1045 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 FAIMQ9NVQ4 179 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 NPAP1Q9NZP6 1156 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 MARCH4Q9P2E8 410 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ERVK-19Q9WJR5 959 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DNAJC15Q9Y5T4 150 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 IGKV6D-21A0A0A0MT36 114 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 IGKV6-21A0A0C4DH24 114 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 C17orf113A0A1B0GUU1 675 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 A0A1W2PQU0 124 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 NFKBIEO00221 500 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GPR37L1O60883 481 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 IFNA17P01571 189 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 IQCF3P0C7M6 154 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 JUNDP17535 347 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CD97P48960 835 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FNTBP49356 437 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 RNASE10Q5GAN6 216 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 AKR1C8PQ5T2L2 129 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PSAPL1Q6NUJ1 521 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TMEM150AQ86TG1 271 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ASB17Q8WXJ9 295 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CIDECQ96AQ7 238 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 FEVQ99581 238 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TSPAN10Q9H1Z9 355 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 LIN28AQ9H9Z2 209 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 RARRES3Q9UL19 164 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 A0A0J9YY10 115 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 P2RX6O15547 441 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 NDUFB2O95178 105 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DHRS4L1P0CG22 281 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 RAB3AP20336 220 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GKP32189 559 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PPP1R8Q12972 351 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 KIR2DS3Q14952 304 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PPA1Q15181 289 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CCDC58Q4VC31 144 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SLC6A19Q695T7 634 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 NIPAL3Q6P499 406 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 NPWQ8N729 165 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 WDR20Q8TBZ3 569 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 F2RL3Q96RI0 385 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TUBGCP6Q96RT7 1819 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 LOC102725191A0A1B0GVB3 256 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 LOC285095A0A1B0GVY8 99 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FAM230AA0A1W2PPH8 454 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TRIM64CA6NLI5 447 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CDC123O75794 336 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 SEC14L2O76054 403 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CDKN2CP42773 168 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CSNK1DP48730 415 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ZNF140P52738 457 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ERVPABLB-1P60509 514 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CXCR4P61073 352 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ATXN7L3Q14CW9 347 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 HMBOX1Q6NT76 420 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PLBD1Q6P4A8 553 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ISCA2Q86U28 154 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DCP2Q8IU60 420 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ANKK1Q8NFD2 765 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 OR51A7Q8NH64 312 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 POC1BQ8TC44 478 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 OR10A5Q9H207 317 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 OR10A2Q9H208 303 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 HEBP1Q9NRV9 189 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ERVK13-1Q9NX77 482 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 APOBEC3BQ9UH17 382 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ZNF337Q9Y3M9 751 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ATAD5Q96QE3 1844 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SYT7O43581 403 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 AMY2AP04746 511 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 HOXC13P31276 330 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 PBX2P40425 430 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZNF611Q8N823 705 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LMF2Q9BU23 707 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 RBCK1Q9BYM8 510 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms