RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ACPTQ9BZG2 426 aa16.13■□□□□ 0.17
SMN2-213ENST00000614240 STMN4Q9H169 189 aaPredicted RBP16.13■□□□□ 0.17
SMN2-213ENST00000614240 ELOVL5Q9NYP7 299 aa16.13■□□□□ 0.17
SMN2-213ENST00000614240 MED11Q9P086 117 aa16.13■□□□□ 0.17
SMN2-213ENST00000614240 ZNF180Q9UJW8 692 aa16.13■□□□□ 0.17
SMN2-213ENST00000614240 CCDC151A5D8V7 595 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 C17orf51A8MQB3 221 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 C16orf97H3BN30 126 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 PLOD3O60568 738 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 COQ9O75208 318 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 SNRPAP09012 282 aaKnown RBP16.12■□□□□ 0.17
SMN2-213ENST00000614240 SBK3P0C264 359 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 GAS1P54826 345 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 B3GALT5-AS1P59052 145 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 RAE1P78406 368 aaKnown RBP16.12■□□□□ 0.17
SMN2-213ENST00000614240 ACKR1Q16570 336 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 UNC50Q53HI1 259 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 LGSNQ5TDP6 509 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 ZNF474Q6S9Z5 364 aaPredicted RBP16.12■□□□□ 0.17
SMN2-213ENST00000614240 LRRC75A-AS1Q8N1F1 130 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 NUDT8Q8WV74 236 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 DCAKDQ8WVC6 231 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 FIG4Q92562 907 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 APIPQ96GX9 242 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 ZC3HAV1LQ96H79 300 aaKnown RBP16.12■□□□□ 0.17
SMN2-213ENST00000614240 ZNF382Q96SR6 550 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 PTGES2Q9H7Z7 377 aa16.12■□□□□ 0.17
SMN2-213ENST00000614240 DEFB108AA8MXU0 73 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 H7C1Q1 480 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 SMAD7O15105 426 aaKnown RBP16.11■□□□□ 0.17
SMN2-213ENST00000614240 TNFRSF21O75509 655 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 LY6G6DO95868 133 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 ANXA4P09525 319 aaPredicted RBP16.11■□□□□ 0.17
SMN2-213ENST00000614240 CRYGSP22914 178 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 TIA1P31483 386 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMN2-213ENST00000614240 UGT2B10P36537 528 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 KIR2DL2P43627 348 aaPredicted RBP16.11■□□□□ 0.17
SMN2-213ENST00000614240 PCYT1AP49585 367 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 CLK3P49761 638 aaKnown RBP16.11■□□□□ 0.17
SMN2-213ENST00000614240 NCBP2P52298 156 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMN2-213ENST00000614240 CYP27C1Q4G0S4 372 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 SPDYAQ5MJ70 313 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 ZNF678Q5SXM1 525 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 TMEM151AQ8N4L1 468 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 OR2M3Q8NG83 312 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 OR5M1Q8NGP8 315 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 Q96MF0 132 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 FMO2Q99518 471 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 BDH2Q9BUT1 245 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 DMGDHQ9UI17 866 aaKnown RBP16.11■□□□□ 0.17
SMN2-213ENST00000614240 MRTO4Q9UKD2 239 aaKnown RBP16.11■□□□□ 0.17
SMN2-213ENST00000614240 STK38LQ9Y2H1 464 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 ZNF337Q9Y3M9 751 aa16.11■□□□□ 0.17
SMN2-213ENST00000614240 A0A087WUV0 522 aaPredicted RBP16.1■□□□□ 0.17
SMN2-213ENST00000614240 H3BML4 177 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 LINC01387J3KSC0 135 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 EMC8O43402 210 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 DLX3O60479 287 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 JUNP05412 331 aaKnown RBP16.1■□□□□ 0.17
SMN2-213ENST00000614240 RFX3P48380 749 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 HTR6P50406 440 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 RPS3AP61247 264 aaKnown RBP16.1■□□□□ 0.17
SMN2-213ENST00000614240 C2orf80Q0P641 193 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 FGFBP1Q14512 234 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 GANABQ14697 944 aaKnown RBP16.1■□□□□ 0.17
SMN2-213ENST00000614240 PON3Q15166 354 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 ZNHIT3Q15649 155 aaPredicted RBP16.1■□□□□ 0.17
SMN2-213ENST00000614240 SGCBQ16585 318 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 DECR1Q16698 335 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 PPP4R4Q6NUP7 873 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 ZNF550Q7Z398 422 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 YTHDF3Q7Z739 585 aaKnown RBP16.1■□□□□ 0.17
SMN2-213ENST00000614240 FADS6Q8N9I5 356 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 RNF138Q8WVD3 245 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 PERPQ96FX8 193 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 PIGQQ9BRB3 760 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 MIEF1Q9NQG6 463 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 PROCRQ9UNN8 238 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 ABCG2Q9UNQ0 655 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 TIMM22Q9Y584 194 aa16.1■□□□□ 0.17
SMN2-213ENST00000614240 MED12LQ86YW9 2145 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 B4DXG7 233 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 H0YC42 278 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 SIAH2O43255 324 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 ENO1P06733 434 aaKnown RBP16.09■□□□□ 0.17
SMN2-213ENST00000614240 DDCP20711 480 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 IMPDH1P20839 514 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 ATP5F1P24539 256 aaPredicted RBP16.09■□□□□ 0.17
SMN2-213ENST00000614240 GSTM5P46439 218 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 SUCLG1P53597 346 aaKnown RBP16.09■□□□□ 0.17
SMN2-213ENST00000614240 TPD52P55327 224 aaPredicted RBP16.09■□□□□ 0.17
SMN2-213ENST00000614240 PSG6Q00889 435 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 TMEM107Q6UX40 140 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 C20orf204Q6ZNR8 217 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 ZNF610Q8N9Z0 462 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 FNDC9Q8TBE3 224 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 DUSP19Q8WTR2 217 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 GFM2Q969S9 779 aaKnown RBP16.09■□□□□ 0.17
SMN2-213ENST00000614240 ARSGQ96EG1 525 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms