RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 OR51I1Q9H343 314 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 RAD21L1Q9H4I0 556 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 SH2D2AQ9NP31 389 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 OLAHQ9NV23 265 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 KLRF1Q9NZS2 232 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 ADAM21Q9UKJ8 722 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 CNOT11Q9UKZ1 510 aaKnown RBP12.18□□□□□ -0.46
MDC1-209ENST00000613547 BOKQ9UMX3 212 aaPredicted RBP12.18□□□□□ -0.46
MDC1-209ENST00000613547 CNTRLQ7Z7A1 2325 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 KALRNO60229 2985 aa12.18□□□□□ -0.46
MDC1-209ENST00000613547 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 CROCCQ5TZA2 2017 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 BBIP1A8MTZ0 92 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 G3V3Y1 287 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 KCNK2O95069 426 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 CYP4B1P13584 511 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 HPGDP15428 266 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 PPIBP23284 216 aaKnown RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 DNASE1L1P49184 302 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 MAN2A2P49641 1150 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 TLE1Q04724 770 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 STX5Q13190 355 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.17□□□□□ -0.46
MDC1-209ENST00000613547 MMEL1Q495T6 779 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 DCST2Q5T1A1 773 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 TNFAIP8L2Q6P589 184 aaPredicted RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 FIGNL1Q6PIW4 674 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 MTDHQ86UE4 582 aaKnown RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 RNF130Q86XS8 419 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 OR5D16Q8NGK9 328 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 ZFP90Q8TF47 636 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 FAR1Q8WVX9 515 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 XAGE5Q8WWM1 108 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 TAAR6Q96RI8 345 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 NODALQ96S42 347 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 OSBPL11Q9BXB4 747 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 ANGPTL4Q9BY76 406 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 PAIP1Q9H074 479 aaKnown RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 TPT1P8Q9HAU6 139 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 HHATLQ9HCP6 504 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 SLC52A3Q9NQ40 469 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 SDHAF3Q9NRP4 125 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 DEPPQ9NTK1 212 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 ASF1BQ9NVP2 202 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 THUMPD1Q9NXG2 353 aaKnown RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 B4GALT7Q9UBV7 327 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 CORO2BQ9UQ03 480 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
MDC1-209ENST00000613547 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.17□□□□□ -0.46
MDC1-209ENST00000613547 ZNF462Q96JM2 2506 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 TMEM247A6NEH6 219 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 EVPLLA8MZ36 301 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 TFECO14948 347 aaPredicted RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 SHOX2O60902 331 aaPredicted RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 ICOSLGO75144 302 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 DCTN3O75935 186 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 UTS2O95399 124 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 FAM107AO95990 144 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 OR12D1P0DN82 309 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 CRATP43155 626 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 PPIAP62937 165 aaKnown RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 HPCAP84074 193 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 PMP22Q01453 160 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 ALDH6A1Q02252 535 aaKnown RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 NFYCQ13952 458 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 PRR30Q53SZ7 412 aaPredicted RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 COQ5Q5HYK3 327 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 PAGE3Q5JUK9 113 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 LRIF1Q5T3J3 769 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 GKAP1Q5VSY0 366 aaPredicted RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 DHDDSQ86SQ9 333 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 SLC22A16Q86VW1 577 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 DPP10Q8N608 796 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 ZNF527Q8NB42 609 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 FAM110BQ8TC76 370 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 PNPT1Q8TCS8 783 aaKnown RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 RAB8BQ92930 207 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 JSRP1Q96MG2 331 aaPredicted RBP12.16□□□□□ -0.46
MDC1-209ENST00000613547 CCT8L2Q96SF2 557 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 TBL1XR1Q9BZK7 514 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 HOXD1Q9GZZ0 328 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 IL1RL2Q9HB29 575 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 ZFP64Q9NPA5 681 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 UBQLN4Q9NRR5 601 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 SLC6A13Q9NSD5 602 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 LIPT1Q9Y234 373 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 PCDHB14Q9Y5E9 798 aa12.16□□□□□ -0.46
MDC1-209ENST00000613547 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 A0A0G2JMM0 328 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 A0A1W2PPB8 328 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 A0A1W2PRS3 328 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms