RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 RNF215Q9Y6U7 377 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 HMX3A6NHT5 357 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ITGAMP11215 1152 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 PTNP21246 168 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 DAP3P51398 398 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 CXCR4P61073 352 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ARHGAP19Q14CB8 494 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 BCL2A1Q16548 175 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ARSJQ5FYB0 599 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 RTL10Q7L3V2 364 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ZNF619Q8N2I2 560 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 SPTSSAQ969W0 71 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 MAN2C1Q9NTJ4 1040 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ASF1BQ9NVP2 202 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 CIB4A0PJX0 185 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 PRSS3P35030 304 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 GATMP50440 423 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ARSDP51689 593 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 AKR1C8PQ5T2L2 129 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 RRNAD1Q96FB5 475 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 FAM46AQ96IP4 442 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 GPR62Q9BZJ7 368 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 CNOT2Q9NZN8 540 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ADAM18Q9Y3Q7 739 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 TSPAN15O95858 294 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 TFP02787 698 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 P04436 131 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 RAC2P15153 192 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 NKX2-5P52952 324 aaPredicted RBP16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 RAET1LQ5VY80 246 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 ZNF529Q6P280 563 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 LARP4Q71RC2 724 aaKnown RBP eCLIP16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 NMNAT1Q9HAN9 279 aaPredicted RBP16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 HEPACAM2A8MVW5 462 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 MAGEA3P43357 314 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 CRTC1Q6UUV9 634 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 DTX3Q8N9I9 347 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 ZFYVE21Q9BQ24 234 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 BIN3Q9NQY0 253 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 SACM1LQ9NTJ5 587 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 ACOT7O00154 380 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 ANKRD28O15084 1053 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 LAMP1P11279 417 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 SNRPD2P62316 118 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 PLBD1Q6P4A8 553 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 DLK2Q6UY11 383 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 NRMQ8IXM6 262 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 TGM7Q96PF1 710 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 RBCK1Q9BYM8 510 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 SPO11Q9Y5K1 396 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 A0A0A6YYH2 397 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 IGLON5A6NGN9 336 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 A6NJ64 397 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 MT-CO2P00403 227 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 OPRL1P41146 370 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 APMAPQ9HDC9 416 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 B3GNT3Q9Y2A9 372 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 PTGDR2Q9Y5Y4 395 aa16.49■□□□□ 0.23
HMGXB3-206ENST00000613459 KRBA1A5PL33 1030 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 RPS17P08708 135 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 DDCP20711 480 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 DCTP40126 519 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 PTH2RP49190 550 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 RAB40BQ12829 278 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 NDUFAF5Q5TEU4 345 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 GPR157Q5UAW9 335 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 ISG20Q96AZ6 181 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 GORASP2Q9H8Y8 452 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 IL23AQ9NPF7 189 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 TEX10Q9NXF1 929 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 LOC285095A0A1B0GVY8 99 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 GGT3PA6NGU5 568 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 CERS1P27544 350 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 POLR2HP52434 150 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 IL17FQ96PD4 163 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 OR14A2Q96R54 314 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 GMLQ99445 158 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 SSX3Q99909 188 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 ZDHHC7Q9NXF8 308 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 MYH8P13535 1937 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 CTXN1P60606 82 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 PITX1P78337 314 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 NKX6-1P78426 367 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 ATAD3CQ5T2N8 411 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 AWAT2Q6E213 333 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 FOXRED1Q96CU9 486 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 LPAR4Q99677 370 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 NAALAD2Q9Y3Q0 740 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 TIMM8BQ9Y5J9 83 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 LILRB3O75022 631 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 CDK5R2Q13319 367 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 RUNX3Q13761 415 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 SLC6A19Q695T7 634 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 PLAG1Q6DJT9 500 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 TMEM150AQ86TG1 271 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 CLECL1Q8IZS7 167 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 WDSUB1Q8N9V3 476 aa16.48■□□□□ 0.23
HMGXB3-206ENST00000613459 ACVR1CQ8NER5 493 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms