RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 SOX30O94993 753 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 TNFSF15O95150 251 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 IGKV1D-16P01601 117 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 CAPNS1P04632 268 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 CCNYL3P0C7X3 344 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 ZNF23P17027 643 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 IST1P53990 364 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 PPP1R8Q12972 351 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 PUM1Q14671 1186 aaKnown RBP eCLIP13.68□□□□□ -0.221e-6■□□□□ 11.3
CIT-219ENST00000612548 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 TMEM205Q6UW68 189 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 PIWIL3Q7Z3Z3 882 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 ZAR1Q86SH2 424 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 VANGL1Q8TAA9 524 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 PINK1Q9BXM7 581 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 MTHFD2LQ9H903 347 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 CACYBPQ9HB71 228 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 VNN3Q9NY84 501 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 NDUFAF4Q9P032 175 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 CBLCQ9ULV8 474 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 CENPVL1A0A0U1RR11 272 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 C2orf92A0A1B0GVN3 265 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 M0R3H8 397 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 KIAA0513O60268 411 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 PRSS23O95084 383 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 EPPINO95925 133 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 IFNW1P05000 195 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 UMODP07911 640 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 CYC1P08574 325 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 ATP6V1C1P21283 382 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 YAP1P46937 504 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 NOVA1P51513 510 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 AQP4P55087 323 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 NHLH1Q02575 133 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 KCNC4Q03721 635 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 EBPQ15125 230 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 OR2T5Q6IEZ7 315 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 TSEN54Q7Z6J9 526 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 CARM1Q86X55 608 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 GALNT4Q8N4A0 578 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 ZSCAN1Q8NBB4 408 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 OR2T29Q8NH02 315 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 APOBEC4Q8WW27 367 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 ADIPOR1Q96A54 375 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 LMF1Q96S06 567 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 LPAR4Q99677 370 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 WDR77Q9BQA1 342 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 AMBRA1Q9C0C7 1298 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 TRIM45Q9H8W5 580 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 ZNF443Q9Y2A4 671 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 GPR55Q9Y2T6 319 aaPredicted RBP13.68□□□□□ -0.22
CIT-219ENST00000612548 U3KQV3 271 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 J3KTA2 159 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 DLL1O00548 723 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 PEX12O00623 359 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 SOCS2O14508 198 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 TM4SF5O14894 197 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 PEX1O43933 1283 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 PIGAP37287 484 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 FOLR3P41439 243 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 PPICP45877 212 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 RNF144AP50876 292 aaPredicted RBP13.67□□□□□ -0.22
CIT-219ENST00000612548 GPR143P51810 404 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 FLYWCH1Q4VC44 716 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 ZBTB49Q6ZSB9 765 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 SLC29A4Q7RTT9 530 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 LACC1Q8IV20 430 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 BCORP1Q8N888 145 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 NFAM1Q8NET5 270 aaPredicted RBP13.67□□□□□ -0.22
CIT-219ENST00000612548 B3GNT7Q8NFL0 401 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 OR4D11Q8NGI4 311 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 CT55Q8WUE5 264 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 ZNF300Q96RE9 604 aaPredicted RBP13.67□□□□□ -0.22
CIT-219ENST00000612548 SLC29A1Q99808 456 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 SPRY4Q9C004 299 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 NRSN2Q9GZP1 204 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 SAP130Q9H0E3 1048 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 THSD1Q9NS62 852 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 IFT52Q9Y366 437 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 CEP250Q9BV73 2442 aa13.67□□□□□ -0.22
CIT-219ENST00000612548 FRG2CA6NGY1 282 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 AGAP5A6NIR3 686 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 CLDN24A6NM45 220 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 OR6C76A6NM76 312 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 E2F6O75461 281 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 LGI1O95970 557 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 CEACAM1P13688 526 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 IL7RP16871 459 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 ITGA2P17301 1181 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 TCN2P20062 427 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 PRKAR1BP31321 381 aa13.66□□□□□ -0.22
CIT-219ENST00000612548 RPS18P62269 152 aaKnown RBP13.66□□□□□ -0.22
CIT-219ENST00000612548 MAPK14Q16539 360 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms