RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 FADS6Q8N9I5 356 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 SEMA6DQ8NFY4 1073 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 OR2M3Q8NG83 312 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 OR52B6Q8NGF0 335 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 HUS1BQ8NHY5 278 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 ANKRD49Q8WVL7 239 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 NXNL1Q96CM4 212 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 SLC35A4Q96G79 324 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 MTERF1Q99551 399 aaKnown RBP9.13□□□□□ -0.95
SSX3-204ENST00000612497 DHRS9Q9BPW9 319 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 PIMREGQ9BSJ6 248 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 DDX31Q9H8H2 851 aaKnown RBP9.13□□□□□ -0.95
SSX3-204ENST00000612497 TMEFF2Q9UIK5 374 aaPredicted RBP9.13□□□□□ -0.95
SSX3-204ENST00000612497 ZKSCAN5Q9Y2L8 839 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 CAPN6Q9Y6Q1 641 aa9.13□□□□□ -0.95
SSX3-204ENST00000612497 ARFGEF3Q5TH69 2177 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 IGHV4-61A0A0C4DH41 118 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 FAM157AC9JC47 383 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 H7C417 338 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 ADAP00813 363 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 KRT14P02533 472 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 GBAP04062 536 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 PORP16435 677 aaPredicted RBP9.12□□□□□ -0.95
SSX3-204ENST00000612497 AGTR1P30556 359 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 BSGP35613 385 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 FABP6P51161 128 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 STX5Q13190 355 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 GANABQ14697 944 aaKnown RBP9.12□□□□□ -0.95
SSX3-204ENST00000612497 P2RY6Q15077 328 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 STK11Q15831 433 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 CARTPTQ16568 116 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 SPANXN3Q5MJ09 141 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 LGSNQ5TDP6 509 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 SLC22A25Q6T423 547 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 LARP4Q71RC2 724 aaKnown RBP eCLIP9.12□□□□□ -0.95
SSX3-204ENST00000612497 GGNQ86UU5 652 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 TXLNBQ8N3L3 684 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 CEP112Q8N8E3 955 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 OR52R1Q8NGF1 315 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 OR10D3Q8NH80 312 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 KCTD4Q8WVF5 259 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 CERS2Q96G23 380 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 RADILQ96JH8 1075 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 HBEGFQ99075 208 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 NAP1L3Q99457 506 aaPredicted RBP9.12□□□□□ -0.95
SSX3-204ENST00000612497 USB1Q9BQ65 265 aaKnown RBP9.12□□□□□ -0.95
SSX3-204ENST00000612497 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 ZNF717Q9BY31 904 aaPredicted RBP9.12□□□□□ -0.95
SSX3-204ENST00000612497 DDX47Q9H0S4 455 aaKnown RBP9.12□□□□□ -0.95
SSX3-204ENST00000612497 ZNF696Q9H7X3 374 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 PTGES2Q9H7Z7 377 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 MAT2BQ9NZL9 334 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 STOML1Q9UBI4 398 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 PRODH2Q9UF12 536 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 ASIC3Q9UHC3 531 aa9.12□□□□□ -0.95
SSX3-204ENST00000612497 NDUFS8O00217 210 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 TMPRSS2O15393 492 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 TSPAN2O60636 221 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 TTC4O95801 387 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 CBX7O95931 251 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 FGGP02679 453 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 COL6A2P12110 1019 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 BMP4P12644 408 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 PTX3P26022 381 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 PIK3CBP42338 1070 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 ARFIP1P53367 373 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 MGAT2Q10469 447 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 MAP4K2Q12851 820 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 ITGADQ13349 1161 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 PPA1Q15181 289 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 GTF2IRD2BQ6EKJ0 949 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 TFAP2EQ6VUC0 442 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 RAD9BQ6WBX8 426 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 BHLHA15Q7RTS1 189 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 GTF2IRD2Q86UP8 949 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 MYLK4Q86YV6 388 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 SPATA6LQ8N4H0 392 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 FAM216AQ8WUB2 273 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 EFHD2Q96C19 240 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 MUCL1Q96DR8 90 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 FOXN4Q96NZ1 517 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 SOX7Q9BT81 388 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 METTL17Q9H7H0 456 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 ZBTB26Q9HCK0 441 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 SDHAF3Q9NRP4 125 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 PAQR5Q9NXK6 330 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 CD274Q9NZQ7 290 aa9.11□□□□□ -0.95
SSX3-204ENST00000612497 GPR55Q9Y2T6 319 aaPredicted RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 PRKDCP78527 4128 aaKnown RBP9.11□□□□□ -0.95
SSX3-204ENST00000612497 VWFP04275 2813 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 NBEAL2Q6ZNJ1 2754 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 FAM95CA0A1B0GW59 222 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 GOLGA6L10A6NI86 522 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 SHISA8B8ZZ34 492 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms