RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 BTBD16Q32M84 506 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 HNRNPA1L2Q32P51 320 aaKnown RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 TOR1AIP1Q5JTV8 583 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 TMEM201Q5SNT2 666 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 GDPGP1Q6ZNW5 385 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 OR51L1Q8NGJ5 315 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 UPRTQ96BW1 309 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SNX18Q96RF0 628 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ENKD1Q9H0I2 346 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 EXTL2Q9UBQ6 330 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ABHD14A-ACY1A0A1B0GW23 586 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 A0A1W2PPV9 198 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 CDC42EP2O14613 210 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 MID1O15344 667 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 CHRNB1P11230 501 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 GCGRP47871 477 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SRP9P49458 86 aaKnown RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 PDX1P52945 283 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 OR10A3P58181 314 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 E2F2Q14209 437 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ENTPD8Q5MY95 495 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 NUP43Q8NFH3 380 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 OR4E2Q8NGC2 313 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SETD6Q8TBK2 473 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SNAPC3Q92966 411 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 PRRC1Q96M27 445 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SLC6A17Q9H1V8 727 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 A0A0B4J203 849 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 C12orf71A8MTZ7 269 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SLC31A1O15431 190 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 LYRM1O43325 122 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 LANCL1O43813 399 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ALPPP05187 535 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 EIF2S1P05198 315 aaKnown RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 PRG2P13727 222 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 PRKCAP17252 672 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 KHKP50053 298 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 EPHA5P54756 1037 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 CDK5Q00535 292 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 MLF2Q15773 248 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ZC3H14Q6PJT7 736 aaKnown RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ADAMTS15Q8TE58 950 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 RASSF5Q8WWW0 418 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 RELTQ969Z4 430 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF514Q96K75 400 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 MRPS30Q9NP92 439 aaKnown RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ADAP2Q9NPF8 381 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 WSB2Q9NYS7 404 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-207ENST00000612273 WDR87Q6ZQQ6 2873 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 DNAJB6O75190 326 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SNRNP200O75643 2136 aaKnown RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 PEPDP12955 493 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 TBXA2RP21731 343 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SHC1P29353 583 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 MAPK9P45984 424 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 GALK2Q01415 458 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 EFR3AQ14156 821 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 ELAVL3Q14576 367 aaKnown RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 AGERQ15109 404 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SIRT6Q8N6T7 355 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 FBXO15Q8NCQ5 510 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 OR51A7Q8NH64 312 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 FAIM2Q9BWQ8 316 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 HINT3Q9NQE9 182 aaKnown RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 UCKL1Q9NWZ5 548 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SLC7A7Q9UM01 511 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 A0A1W2PP55 124 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 ARRDC5A6NEK1 342 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 CLUP10909 449 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 EVI2BP34910 448 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 PCDH1Q08174 1060 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 ASAH1Q13510 395 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SAMD12Q8N8I0 201 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 BEST4Q8NFU0 473 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 OR13C5Q8NGS8 318 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 OR2A1Q8NGT9 310 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SUN3Q8TAQ9 357 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 PIGXQ8TBF5 258 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 CDS1Q92903 461 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 TNFRSF10DQ9UBN6 386 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 FBXL4Q9UKA2 621 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 INSL6Q9Y581 213 aa13.16□□□□□ -0.3
COL6A1-207ENST00000612273 SIRT4Q9Y6E7 314 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-207ENST00000612273 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms