RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TMBIM4Q9HC24 238 aa13.21□□□□□ -0.29
HDDC2-204ENST00000608295 SIRT3Q9NTG7 399 aaPredicted RBP13.21□□□□□ -0.29
HDDC2-204ENST00000608295 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.29
HDDC2-204ENST00000608295 PPP4R1LQ9P1A2 415 aa13.21□□□□□ -0.29
HDDC2-204ENST00000608295 EIF3LQ9Y262 564 aaKnown RBP13.21□□□□□ -0.29
HDDC2-204ENST00000608295 WBP11Q9Y2W2 641 aaKnown RBP13.21□□□□□ -0.29
HDDC2-204ENST00000608295 NAV2Q8IVL1 2488 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 A0A1B0GVC2 190 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 A0A1W2PRB8 838 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 B4DXG7 233 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 IGKV1D-16P01601 117 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 PRPS2P11908 318 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 GRK2P25098 689 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 ELAVL4P26378 380 aaKnown RBP13.2□□□□□ -0.3
HDDC2-204ENST00000608295 DIO3P55073 304 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 SRYQ05066 204 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 CRYZQ08257 329 aaKnown RBP13.2□□□□□ -0.3
HDDC2-204ENST00000608295 ART3Q13508 389 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 LASP1Q14847 261 aaKnown RBP13.2□□□□□ -0.3
HDDC2-204ENST00000608295 CPTPQ5TA50 214 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 RTL6Q6ICC9 239 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 XKRXQ6PP77 449 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 ULK2Q8IYT8 1036 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 CLECL1Q8IZS7 167 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 WDSUB1Q8N9V3 476 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 OR4K17Q8NGC6 315 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 RND1Q92730 232 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 ARL8AQ96BM9 186 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 FAM120BQ96EK7 910 aaKnown RBP13.2□□□□□ -0.3
HDDC2-204ENST00000608295 MARK4Q96L34 752 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 CXorf36Q9H7Y0 433 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 QPCTLQ9NXS2 382 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 NOP53Q9NZM5 478 aaKnown RBP13.2□□□□□ -0.3
HDDC2-204ENST00000608295 ATP6V1HQ9UI12 483 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 PCNX3Q9H6A9 2034 aa13.2□□□□□ -0.3
HDDC2-204ENST00000608295 UNC79Q9P2D8 2635 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 NPIPA5A0A0B4J1W7 369 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 NPIPA7E9PJI5 369 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 EMC8O43402 210 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 TBX19O60806 448 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 ABCB7O75027 752 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 SLITRK5O94991 958 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 UTS2O95399 124 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 NPIPA8P0DM63 369 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 GLI4P10075 376 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 BMP7P18075 431 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 FRKP42685 505 aaPredicted RBP13.19□□□□□ -0.3
HDDC2-204ENST00000608295 PNLIPRP2P54317 469 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 CASP9P55211 416 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
HDDC2-204ENST00000608295 MRPS22P82650 360 aaKnown RBP13.19□□□□□ -0.3
HDDC2-204ENST00000608295 DUSP5Q16690 384 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 GRAMD1BQ3KR37 738 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 OR4F3Q6IEY1 312 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 ZAR1Q86SH2 424 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 MARCH3Q86UD3 253 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 ANKRD46Q86W74 232 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 PLCZ1Q86YW0 608 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 COX18Q8N8Q8 333 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 SLC16A11Q8NCK7 471 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 OR5M1Q8NGP8 315 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 CDS1Q92903 461 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 TLCD1Q96CP7 247 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 MTERF3Q96E29 417 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 GIMAP5Q96F15 307 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 TTYH2Q9BSA4 534 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 LMF2Q9BU23 707 aaKnown RBP13.19□□□□□ -0.3
HDDC2-204ENST00000608295 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 UGT2B28Q9BY64 529 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 ACSS1Q9NUB1 689 aaPredicted RBP13.19□□□□□ -0.3
HDDC2-204ENST00000608295 GIN1Q9NXP7 522 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 MED11Q9P086 117 aa13.19□□□□□ -0.3
HDDC2-204ENST00000608295 MAST4O15021 2626 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 WDR1O75083 606 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 KCNH1O95259 989 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 HMGN2P05204 90 aaKnown RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 HPNP05981 417 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 PRF1P14222 555 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 COX6B1P14854 86 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 RPL3P39023 403 aaKnown RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 ADH7P40394 386 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 STARP49675 285 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 PRR5P85299 388 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 MAD2L1Q13257 205 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 ZNF630Q2M218 657 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 ACSF3Q4G176 576 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 UBQLNLQ8IYU4 475 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 CDRT4Q8N9R6 151 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 ZNF764Q96H86 408 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-204ENST00000608295 SFXN2Q96NB2 322 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 TRIB1Q96RU8 372 aa13.18□□□□□ -0.3
HDDC2-204ENST00000608295 TIMP4Q99727 224 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms