RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 EXOSC3Q9NQT5 275 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GPR173Q9NS66 373 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SLC35D1Q9NTN3 355 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM248Q9NWD8 314 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 A0A0A6YYH2 397 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NKX6-3A6NJ46 265 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 A6NJ64 397 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 H0Y8G0 127 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MEIS2O14770 477 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 CYTIPO60759 359 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SEMA7AO75326 666 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 RDH16O75452 317 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 PROSCO94903 275 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GLCEO94923 617 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 EOMESO95936 686 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 IL1AP01583 271 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 PGAM1P18669 254 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 CNR1P21554 472 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 EPHA1P21709 976 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 BCKDHBP21953 392 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NFYAP23511 347 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 HTR2AP28223 471 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NNMTP40261 264 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SMSP52788 366 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 VSX2P58304 361 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SNRPFP62306 86 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SELENOTP62341 195 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NOGQ13253 232 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GRM3Q14832 879 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MAD2L1BPQ15013 274 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GFOD2Q3B7J2 385 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF628Q5EBL2 1059 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 PRSS36Q5K4E3 855 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NSUN5P2Q63ZY6 315 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 VHLLQ6RSH7 139 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 NXPE4Q6UWF7 544 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ALKAL2Q6UX46 152 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GPR149Q86SP6 731 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 CPNE8Q86YQ8 564 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 DENND1CQ8IV53 801 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF444Q8N0Y2 327 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 OR2T35Q8NGX2 323 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 OR14C36Q8NHC7 312 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 HMGCLL1Q8TB92 370 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF675Q8TD23 568 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 GRHL3Q8TE85 626 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 EXTL1Q92935 676 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ELMOD3Q96FG2 381 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 PITX2Q99697 317 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 FUZQ9BT04 418 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 MSTO1Q9BUK6 570 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 WRAP53Q9BUR4 548 aaKnown RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 ST6GALNAC4Q9H4F1 302 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 KRCC1Q9NPI7 259 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-215ENST00000602574 SLC25A13Q9UJS0 675 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
COMMD3-215ENST00000602574 TBC1D3DA0A087WVF3 549 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TBC1D3IA0A087WXS9 549 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TBC1D3EA0A087X179 549 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TBC1D3LB9A6J9 549 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF670-ZNF695F2Z2N8 137 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TLR5O60602 858 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ATP6AP2O75787 350 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
COMMD3-215ENST00000602574 KAT7O95251 611 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 SIX6O95475 246 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 SNRPCP09234 159 aaKnown RBP8.35□□□□□ -1.07
COMMD3-215ENST00000602574 GIPP09681 153 aaPredicted RBP8.35□□□□□ -1.07
COMMD3-215ENST00000602574 GKN3PP0CG01 181 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ADCYAP1P18509 176 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 MGAT1P26572 445 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 MAGEA12P43365 314 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 CLDN8P56748 225 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 CDK6Q00534 326 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 RASGEF1BQ0VAM2 473 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 FAM187BQ17R55 369 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 SCGB2B2Q4G0G5 96 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM255AQ5JRV8 349 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 LIPKQ5VXJ0 399 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 OR52W1Q6IF63 320 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TBC1D3CQ6IPX1 549 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 H3F3CQ6NXT2 135 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 GJB7Q6PEY0 223 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 GSG1LQ6UXU4 331 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TMIGD1Q6UXZ0 262 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TAF8Q7Z7C8 310 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 ADGRA1Q86SQ6 560 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 IGDCC3Q8IVU1 814 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 BAP18Q8IXM2 172 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TBC1D3Q8IZP1 549 aaPredicted RBP8.35□□□□□ -1.07
COMMD3-215ENST00000602574 CHST13Q8NET6 341 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 BEST4Q8NFU0 473 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 OR10K1Q8NGX5 313 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 OR6K3Q8NGY3 331 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 FIBINQ8TAL6 211 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 DUSP19Q8WTR2 217 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 POF1BQ8WVV4 589 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 TFAP2BQ92481 460 aa8.35□□□□□ -1.07
COMMD3-215ENST00000602574 NSUN4Q96CB9 384 aaKnown RBP8.35□□□□□ -1.07
COMMD3-215ENST00000602574 DIRAS2Q96HU8 199 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms