RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 S100A3P33764 101 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 MAGEA5P43359 124 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 KCNJ2P63252 427 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 SNTA1Q13424 505 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 KRTCAP3Q53RY4 240 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 ANXA8L1Q5VT79 327 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 SAXO2Q658L1 398 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 GFRALQ6UXV0 394 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 APOOLQ6UXV4 268 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 Q6ZPB1 254 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 ACAD11Q709F0 780 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 WDSUB1Q8N9V3 476 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 STACQ99469 402 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 PIGUQ9H490 435 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 NPHS2Q9NP85 383 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 DUSP22Q9NRW4 184 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 A0A1B0GVC2 190 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 C2orf72A6NCS6 295 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 PRAMEF25A6NGN4 478 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 SNPHO15079 494 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 ENDOUP21128 410 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 TP53BP2Q13625 1128 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 EFR3AQ14156 821 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 HSP90B2PQ58FF3 399 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC30A6Q6NXT4 461 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 SZRD1Q7Z422 152 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 MIER2Q8N344 545 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 FAM109AQ8N4B1 249 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 OR4A15Q8NGL6 344 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 MIPOL1Q8TD10 442 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC9A6Q92581 669 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 MOAP1Q96BY2 351 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 ZNF317Q96PQ6 595 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 OSBPL11Q9BXB4 747 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 ACTRT3Q9BYD9 372 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 DEFB127Q9H1M4 99 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 FGFR1OP2Q9NVK5 253 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 OR10H1Q9Y4A9 318 aa17.82■□□□□ 0.44
SHKBP1-221ENST00000599833 SPTAN1Q13813 2472 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 RNF103-CHMP3A0A140T963 221 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 FAM234BA2RU67 622 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 CFLARO15519 480 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 MDH1P40925 334 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 PRIM2P49643 509 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 ATP4BP51164 291 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 RPS26P62854 115 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 RCAN2Q14206 197 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 ZNHIT3Q15649 155 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 DECR1Q16698 335 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 TIGD3Q6B0B8 471 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 C6orf120Q7Z4R8 191 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 GALNT10Q86SR1 603 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC22A16Q86VW1 577 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 OR5D16Q8NGK9 328 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 GPR151Q8TDV0 419 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 CDS1Q92903 461 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 NEURL3Q96EH8 262 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 RMND5BQ96G75 393 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 ZNF597Q96LX8 424 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 GNRHR2Q96P88 292 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 OR52E6Q96RD3 313 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 METTL7AQ9H8H3 244 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 DCTN4Q9UJW0 460 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 BOKQ9UMX3 212 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 C15orf41Q9Y2V0 281 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 DIDO1Q9BTC0 2240 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 DOPEY2Q9Y3R5 2298 aa17.81■□□□□ 0.44
SHKBP1-221ENST00000599833 ADGRG4Q8IZF6 3080 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 MYO7BQ6PIF6 2116 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 NCOA6Q14686 2063 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 A0A1B0GTH9 108 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 ZIC2O95409 532 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 CPSF4O95639 269 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 IL6P05231 212 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 ALOX5P09917 674 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 UQCRC2P22695 453 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 IL12BP29460 328 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 EVI2BP34910 448 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 SOAT1P35610 550 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 POLR2JP52435 117 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 MVDP53602 400 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 RPP38P78345 283 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 PLGLB1Q02325 96 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 GRAMD1BQ3KR37 738 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 VPS26BQ4G0F5 336 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 CCNJQ5T5M9 372 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 FIGNL1Q6PIW4 674 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 MSANTD1Q6ZTZ1 278 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 TRILQ7L0X0 811 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 GHDCQ8N2G8 530 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 PRR7Q8TB68 274 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 VPS33AQ96AX1 596 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 TMCO6Q96DC7 493 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 OR7D2Q96RA2 312 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 SIKE1Q9BRV8 207 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 BTBD2Q9BX70 525 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 QPCTLQ9NXS2 382 aa17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 ERRFI1Q9UJM3 462 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-221ENST00000599833 OSGIN2Q9Y236 505 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms