RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 COQ9O75208 318 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 TSPAN8P19075 237 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 HK1P19367 917 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 TCEA1P23193 301 aaKnown RBP19.09■□□□□ 0.65
PNKP-212ENST00000599454 MPIP34949 423 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 SLC7A5Q01650 507 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 OCRLQ01968 901 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 RAET1LQ5VY80 246 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 C8orf74Q6P047 294 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 YTHDF3Q7Z739 585 aaKnown RBP19.09■□□□□ 0.65
PNKP-212ENST00000599454 UBQLNLQ8IYU4 475 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 CDYL2Q8N8U2 506 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 CAVIN3Q969G5 261 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 EFHD2Q96C19 240 aaPredicted RBP19.09■□□□□ 0.65
PNKP-212ENST00000599454 OPN3Q9H1Y3 402 aaPredicted RBP19.09■□□□□ 0.65
PNKP-212ENST00000599454 DSN1Q9H410 356 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 PTGES2Q9H7Z7 377 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 UBTD1Q9HAC8 227 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 ULK1O75385 1050 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 SLITRK5O94991 958 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 CCKARP32238 428 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 ACSM2AQ08AH3 577 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 CYP27C1Q4G0S4 372 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 ACSM2BQ68CK6 577 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 TMEM151AQ8N4L1 468 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 OR2M3Q8NG83 312 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 FIG4Q92562 907 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 ZNF382Q96SR6 550 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 RNF122Q9H9V4 155 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 ZNF180Q9UJW8 692 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 STK38LQ9Y2H1 464 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 USF3Q68DE3 2245 aa19.08■□□□□ 0.64
PNKP-212ENST00000599454 SCO2O43819 266 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 NME6O75414 186 aaPredicted RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 CGAP01215 116 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 SBK3P0C264 359 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 TAC1P20366 129 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 KCNJ5P48544 419 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 CLDN15P56746 228 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 RPS3AP61247 264 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 SIRPAP78324 504 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 RAE1P78406 368 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 PSG6Q00889 435 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 GLYR1Q49A26 553 aaPredicted RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 TCHHL1Q5QJ38 904 aaPredicted RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 UBAP2Q5T6F2 1119 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 GALNT18Q6P9A2 607 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 GPRIN3Q6ZVF9 776 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 CIARTQ8N365 385 aaPredicted RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 OR7G2Q8NG99 324 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 OR4N2Q8NGD1 307 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 UHMK1Q8TAS1 419 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 C16orf78Q8WTQ4 265 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 ANP32BQ92688 251 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 MARK4Q96L34 752 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 PIGQQ9BRB3 760 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 PINK1Q9BXM7 581 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 ACPTQ9BZG2 426 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 GSX2Q9BZM3 304 aa19.07■□□□□ 0.64
PNKP-212ENST00000599454 CDC42EP4Q9H3Q1 356 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 MRTO4Q9UKD2 239 aaKnown RBP19.07■□□□□ 0.64
PNKP-212ENST00000599454 A0A087WV62 115 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 TRIM49D1C9J1S8 452 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 FADS1O60427 444 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 SUPT7LO94864 414 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 FCGR2AP12318 317 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 HMOX2P30519 316 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 TIA1P31483 386 aaKnown RBP eCLIP19.06■□□□□ 0.64
PNKP-212ENST00000599454 CLK3P49761 638 aaKnown RBP19.06■□□□□ 0.64
PNKP-212ENST00000599454 ETF1P62495 437 aaKnown RBP19.06■□□□□ 0.64
PNKP-212ENST00000599454 CKAP4Q07065 602 aaKnown RBP19.06■□□□□ 0.64
PNKP-212ENST00000599454 ZNF155Q12901 538 aaPredicted RBP19.06■□□□□ 0.64
PNKP-212ENST00000599454 METTL6Q8TCB7 284 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 GFM2Q969S9 779 aaKnown RBP19.06■□□□□ 0.64
PNKP-212ENST00000599454 BBS4Q96RK4 519 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 FAM120CQ9NX05 1096 aaKnown RBP19.06■□□□□ 0.64
PNKP-212ENST00000599454 PROCRQ9UNN8 238 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 ZNF337Q9Y3M9 751 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 PRR14LQ5THK1 2151 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 ZANQ9Y493 2812 aa19.06■□□□□ 0.64
PNKP-212ENST00000599454 OR2M5A3KFT3 312 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 CCDC151A5D8V7 595 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 SEC14L5O43304 696 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 CHN1P15882 459 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 TBXA2RP21731 343 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 SUCLG1P53597 346 aaKnown RBP19.05■□□□□ 0.64
PNKP-212ENST00000599454 GUSBP1Q15486 140 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 DECR1Q16698 335 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 UNC50Q53HI1 259 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 ZNF678Q5SXM1 525 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 METTL25Q8N6Q8 603 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 ZNF610Q8N9Z0 462 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 PPP1R14CQ8TAE6 165 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 FNDC9Q8TBE3 224 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 C1GALT1C1Q96EU7 318 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 C11orf24Q96F05 449 aaPredicted RBP19.05■□□□□ 0.64
PNKP-212ENST00000599454 PERPQ96FX8 193 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 SIRT5Q9NXA8 310 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 MED11Q9P086 117 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 GRID1Q9ULK0 1009 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms