RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 DLX5P56178 289 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 SLC30A6Q6NXT4 461 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 PLXDC2Q6UX71 529 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 Q6ZSR9 355 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 ZCCHC23Q6ZST2 131 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
SCAF1-203ENST00000598359 IQCGQ9H095 443 aaKnown RBP12.53□□□□□ -0.4
SCAF1-203ENST00000598359 LRTM1Q9HBL6 345 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 FLRT3Q9NZU0 649 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 GIMAP2Q9UG22 337 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 BAIAP2L1Q9UHR4 511 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 FBXL2Q9UKC9 423 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 OR10H1Q9Y4A9 318 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 HCFC1P51610 2035 aa12.53□□□□□ -0.4
SCAF1-203ENST00000598359 KIAA1549Q9HCM3 1950 aa12.52□□□□□ -0.4
SCAF1-203ENST00000598359 UPK1AO00322 258 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 SLC28A1O00337 649 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 RGS14O43566 566 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 TGDSO95455 350 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-203ENST00000598359 CYP4B1P13584 511 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 IL12BP29460 328 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 NTSP30990 170 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 KRT20P35900 424 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 GSTM5P46439 218 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 NAA20P61599 178 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 RPL38P63173 70 aaKnown RBP12.52□□□□□ -0.41
SCAF1-203ENST00000598359 PSG6Q00889 435 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 SNTA1Q13424 505 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 GALNTL6Q49A17 601 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 ZNF385BQ569K4 471 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 ZNF551Q7Z340 670 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-203ENST00000598359 DDIASQ8IXT1 998 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-203ENST00000598359 OR14L1PQ8NHC6 308 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 ABTB1Q969K4 478 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-203ENST00000598359 CIDECQ96AQ7 238 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-203ENST00000598359 TMCO6Q96DC7 493 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 ERP27Q96DN0 273 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 SLC35A4Q96G79 324 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 TSSK3Q96PN8 268 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 TRIB1Q96RU8 372 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 C1orf109Q9NX04 203 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 TAS2R9Q9NYW1 312 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 KLHL14Q9P2G3 628 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 DNAJC15Q9Y5T4 150 aa12.52□□□□□ -0.41
SCAF1-203ENST00000598359 AHRRA9YTQ3 701 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 SCO2O43819 266 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 EPPINO95925 133 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 SDC1P18827 310 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 EFNA1P20827 205 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 BMP5P22003 454 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 ARRB2P32121 409 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 RFX3P48380 749 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 STARP49675 285 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 AGFG1P52594 562 aaKnown RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 GAS1P54826 345 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 SRYQ05066 204 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 HSPB3Q12988 150 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 RFTN2Q52LD8 501 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 NHSL2Q5HYW2 709 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 KANK2Q63ZY3 851 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 TRPM8Q7Z2W7 1104 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 PLCZ1Q86YW0 608 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 RELL2Q8NC24 303 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 C10orf82Q8WW14 230 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 ELP4Q96EB1 424 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 C7orf26Q96N11 449 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 EQTNQ9NQ60 294 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 DDX18Q9NVP1 670 aaKnown RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 TAS2R7Q9NYW3 318 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 ITGB1BP2Q9UKP3 347 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 C19orf53Q9UNZ5 99 aaPredicted RBP12.51□□□□□ -0.41
SCAF1-203ENST00000598359 PCDHGB3Q9Y5G1 929 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 WIF1Q9Y5W5 379 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 MED12Q93074 2177 aa12.51□□□□□ -0.41
SCAF1-203ENST00000598359 INTS1Q8N201 2190 aaKnown RBP12.5□□□□□ -0.41
SCAF1-203ENST00000598359 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
SCAF1-203ENST00000598359 A0A087WV62 115 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 PIP5K1BO14986 540 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 LSM1O15116 133 aaKnown RBP12.5□□□□□ -0.41
SCAF1-203ENST00000598359 PDPK1O15530 556 aa12.5□□□□□ -0.41
SCAF1-203ENST00000598359 ABCB7O75027 752 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms