RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 EIF4E1BA6NMX2 242 aaKnown RBP13.82□□□□□ -0.2
TRIM28-207ENST00000597136 TNFRSF21O75509 655 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 NEURL1O76050 574 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 MAP3K8P41279 467 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 GSK3BP49841 420 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 HLCSP50747 726 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 SSR4P51571 173 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 OR1C1Q15619 314 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 ADRM1Q16186 407 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 NNATQ16517 81 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 SPATS1Q496A3 300 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 ZCCHC12Q6PEW1 402 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 MYO7BQ6PIF6 2116 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 LYPD8Q6UX82 237 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 MDGA2Q7Z553 956 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 WDR53Q7Z5U6 358 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-207ENST00000597136 SERPINA11Q86U17 422 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 TMEM156Q8N614 296 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 CDRT4Q8N9R6 151 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 SLC16A11Q8NCK7 471 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 MDS2Q8NDY4 140 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 HOXB13Q92826 284 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-207ENST00000597136 PNPLA2Q96AD5 504 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 VSTM2LQ96N03 204 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 ITPAQ9BY32 194 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 NXF5Q9H1B4 397 aaKnown RBP13.82□□□□□ -0.2
TRIM28-207ENST00000597136 OR51I1Q9H343 314 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 MMADHCQ9H3L0 296 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-207ENST00000597136 FOLH1BQ9HBA9 442 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 LRFN1Q9P244 771 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 PRODH2Q9UF12 536 aa13.82□□□□□ -0.2
TRIM28-207ENST00000597136 B8ZZF3 427 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 HMGN4O00479 90 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 SUV39H1O43463 412 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 DNAJA2O60884 412 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 PDE5AO76074 875 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 NUDT7P0C024 238 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 BMP2P12643 396 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 HSD17B1P14061 328 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 TRHRP34981 398 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 PRIM2P49643 509 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 KHKP50053 298 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 MLLT10P55197 1068 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 KCNJ2P63252 427 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 TXNL4AP83876 142 aaKnown RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 ZNF155Q12901 538 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 ZNF169Q14929 603 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 CYP51A1Q16850 503 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 PRR30Q53SZ7 412 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 CDC73Q6P1J9 531 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 PGM2L1Q6PCE3 622 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 NET1Q7Z628 596 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 IFNEQ86WN2 208 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 PRR22Q8IZ63 422 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 FBXW8Q8N3Y1 598 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 OR5D16Q8NGK9 328 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 FBXO30Q8TB52 745 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 JADE3Q92613 823 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 UTP4Q969X6 686 aaKnown RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 OTUB1Q96FW1 271 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 ALG2Q9H553 416 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 KLHL1Q9NR64 748 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 ABI3Q9P2A4 366 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 USP22Q9UPT9 525 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 CFL2Q9Y281 166 aa13.81□□□□□ -0.2
TRIM28-207ENST00000597136 GCN1Q92616 2671 aaKnown RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 DIDO1Q9BTC0 2240 aaKnown RBP13.81□□□□□ -0.2
TRIM28-207ENST00000597136 ANKRD65E5RJM6 399 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 SORBS2O94875 1100 aaKnown RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 OR12D1P0DN82 309 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 ACP2P11117 423 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 CYB561P49447 251 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 ANXA11P50995 505 aaKnown RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 CORO7P57737 925 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 DSTNP60981 165 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 GCNT6Q5T4J0 391 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 HLA-DQA1Q5Y7H0 255 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 DESI1Q6ICB0 168 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 PTOV1Q86YD1 416 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 FAM156AQ8NDB6 213 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 OR2T12Q8NG77 320 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 XAGE5Q8WWM1 108 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 ASB15Q8WXK1 588 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 SLC9A6Q92581 669 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 RAB8BQ92930 207 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 TP53INP1Q96A56 240 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 SLC35A4Q96G79 324 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 REXO5Q96IC2 774 aaKnown RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 OR7D2Q96RA2 312 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 KCTD14Q9BQ13 255 aaPredicted RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 LMF2Q9BU23 707 aaKnown RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 SPATA9Q9BWV2 254 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 TRIM45Q9H8W5 580 aaPredicted RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 THUMPD1Q9NXG2 353 aaKnown RBP13.8□□□□□ -0.2
TRIM28-207ENST00000597136 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 ANAPC2Q9UJX6 822 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 NTNG1Q9Y2I2 539 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 KCNE3Q9Y6H6 103 aa13.8□□□□□ -0.2
TRIM28-207ENST00000597136 DUXAA6NLW8 204 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms