RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 BDH2Q9BUT1 245 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 PINK1Q9BXM7 581 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 CDC42EP4Q9H3Q1 356 aaKnown RBP9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 SLC35C2Q9NQQ7 365 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 SDHAF3Q9NRP4 125 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 ELOVL5Q9NYP7 299 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 MED11Q9P086 117 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 NFU1Q9UMS0 254 aa9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
CHMP2A-202ENST00000596708 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 DEFB108AA8MXU0 73 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 H3BML4 177 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 C16orf97H3BN30 126 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 SIAH2O43255 324 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ULK1O75385 1050 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 TNFRSF21O75509 655 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 SBK3P0C264 359 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 CRYGSP22914 178 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 PCSK6P29122 969 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 EVI2BP34910 448 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 MPIP34949 423 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 KIR2DL2P43627 348 aaPredicted RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 CLK3P49761 638 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 SUCLG1P53597 346 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 GAS1P54826 345 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 B3GALT5-AS1P59052 145 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 PSPHP78330 225 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 RAE1P78406 368 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ACSM2AQ08AH3 577 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF155Q12901 538 aaPredicted RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 CSTF3Q12996 717 aaKnown RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 STX5Q13190 355 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 SGCBQ16585 318 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 UNC50Q53HI1 259 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ACSM2BQ68CK6 577 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ANKRD34AQ69YU3 496 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 PPP4R4Q6NUP7 873 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF550Q7Z398 422 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 OR2M3Q8NG83 312 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 OR7G2Q8NG99 324 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 OR5M1Q8NGP8 315 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 CDC26Q8NHZ8 85 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ARSGQ96EG1 525 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 PERPQ96FX8 193 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 APIPQ96GX9 242 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 C1QTNF3Q9BXJ4 246 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 EBPLQ9BY08 206 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 KLHL4Q9C0H6 718 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 STMN4Q9H169 189 aaPredicted RBP9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 PTGES2Q9H7Z7 377 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 PROCRQ9UNN8 238 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 ZNF337Q9Y3M9 751 aa9.53□□□□□ -0.88
CHMP2A-202ENST00000596708 HEATR1Q9H583 2144 aaKnown RBP9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 B4DXG7 233 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 H0YC42 278 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 EMC8O43402 210 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 PLOD3O60568 738 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 COQ9O75208 318 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 CTAGE8P0CG41 777 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 TIA1P31483 386 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 UGT2B10P36537 528 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 RFX3P48380 749 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 PCYT1AP49585 367 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 TPD52P55327 224 aaPredicted RBP9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 RPS3AP61247 264 aaKnown RBP9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 ETF1P62495 437 aaKnown RBP9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 PSG6Q00889 435 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 C2orf80Q0P641 193 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 PON3Q15166 354 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 SPIN4Q56A73 249 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 SPDYAQ5MJ70 313 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 ZNF678Q5SXM1 525 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 PRSS57Q6UWY2 283 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 GPRIN3Q6ZVF9 776 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 CTAGE4Q8IX94 777 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 FADS6Q8N9I5 356 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 ZNF610Q8N9Z0 462 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 DUSP19Q8WTR2 217 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 DCAKDQ8WVC6 231 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 IFT81Q8WYA0 676 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 COX4I2Q96KJ9 171 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 FUT8Q9BYC5 575 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 PRRG4Q9BZD6 226 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 ACPTQ9BZG2 426 aa9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
CHMP2A-202ENST00000596708 HIVEP2P31629 2446 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 OR2M5A3KFT3 312 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 LINC01387J3KSC0 135 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 GMFGO60234 142 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 FADS1O60427 444 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 JUNP05412 331 aaKnown RBP9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 SNRPAP09012 282 aaKnown RBP9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 ANXA4P09525 319 aaPredicted RBP9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 CD8BP10966 210 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 IMPDH1P20839 514 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 TBXA2RP21731 343 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 HTR6P50406 440 aa9.51□□□□□ -0.89
CHMP2A-202ENST00000596708 NCBP2P52298 156 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms