RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 PLIN3O60664 434 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 JUNP05412 331 aaKnown RBP12.03□□□□□ -0.48
APOC1-209ENST00000592885 FAM153BP0C7A2 387 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 UROSP10746 265 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 PEPDP12955 493 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 CRHR1P34998 444 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 MC3RP41968 323 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 CPA2P48052 419 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 CLK3P49761 638 aaKnown RBP12.03□□□□□ -0.48
APOC1-209ENST00000592885 EEFSECP57772 596 aaKnown RBP12.03□□□□□ -0.48
APOC1-209ENST00000592885 SRYQ05066 204 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 DECR1Q16698 335 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 FAM153CQ494X1 144 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 CFAP157Q5JU67 520 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 OR2A2Q6IF42 318 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 TMEM107Q6UX40 140 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 SH2D5Q6ZV89 423 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 GRAMD2AQ8IUY3 354 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 CDC26Q8NHZ8 85 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 DACH2Q96NX9 599 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 RHOXF2Q9BQY4 288 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 LMF2Q9BU23 707 aaKnown RBP12.03□□□□□ -0.48
APOC1-209ENST00000592885 G6PC3Q9BUM1 346 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 FAM120CQ9NX05 1096 aaKnown RBP12.03□□□□□ -0.48
APOC1-209ENST00000592885 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
APOC1-209ENST00000592885 PRRC2AP48634 2157 aaKnown RBP12.03□□□□□ -0.48
APOC1-209ENST00000592885 A0A1W2PPM1 405 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 UPK1AO00322 258 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 FADS1O60427 444 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 ZIC3O60481 467 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 IL33O95760 270 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 RAF1P04049 648 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 NEFHP12036 1026 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 AGFG1P52594 562 aaKnown RBP12.02□□□□□ -0.49
APOC1-209ENST00000592885 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 OCRLQ01968 901 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 FOXF2Q12947 444 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 FGFBP1Q14512 234 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 LIPMQ5VYY2 423 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 FBXW10Q5XX13 1052 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 NOXRED1Q6NXP6 359 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 CHMP1BQ7LBR1 199 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 TGIF2LYQ8IUE0 185 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 MEIOBQ8N635 442 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 OR2M3Q8NG83 312 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 OR4N2Q8NGD1 307 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 SMPDL3BQ92485 455 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 INTS12Q96CB8 462 aaKnown RBP12.02□□□□□ -0.49
APOC1-209ENST00000592885 AMDHD1Q96NU7 426 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 YIPF4Q9BSR8 244 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 IQCGQ9H095 443 aaKnown RBP12.02□□□□□ -0.49
APOC1-209ENST00000592885 GLIPR2Q9H4G4 154 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 PTGES2Q9H7Z7 377 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 OXSMQ9NWU1 459 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 GALNT8Q9NY28 637 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 POLR3HQ9Y535 204 aaPredicted RBP12.02□□□□□ -0.49
APOC1-209ENST00000592885 MED12LQ86YW9 2145 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 MED12Q93074 2177 aa12.02□□□□□ -0.49
APOC1-209ENST00000592885 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 SLC28A1O00337 649 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 MSTNO14793 375 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 RGS14O43566 566 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 SCO2O43819 266 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 TBX19O60806 448 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 TNFSF13O75888 250 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 CD99P14209 185 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 CPA3P15088 417 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 STARP49675 285 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 PPP2R2AP63151 447 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 GLYR1Q49A26 553 aaPredicted RBP12.01□□□□□ -0.49
APOC1-209ENST00000592885 OR5M10Q6IEU7 315 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 P4HA3Q7Z4N8 544 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 ZFP28Q8NHY6 868 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.01□□□□□ -0.49
APOC1-209ENST00000592885 HOXB13Q92826 284 aaPredicted RBP12.01□□□□□ -0.49
APOC1-209ENST00000592885 ELP4Q96EB1 424 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 FCRL1Q96LA6 429 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 CCT7Q99832 543 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 PLEKHA6Q9Y2H5 1048 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 ZNF175Q9Y473 711 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 CCL27Q9Y4X3 112 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 ITPR3Q14573 2671 aa12.01□□□□□ -0.49
APOC1-209ENST00000592885 IGLV3-32A0A0A0MS00 114 aa12□□□□□ -0.49
APOC1-209ENST00000592885 A0A1W2PNV4 684 aa12□□□□□ -0.49
APOC1-209ENST00000592885 SH3D21A4FU49 640 aa12□□□□□ -0.49
APOC1-209ENST00000592885 SLC22A20A6NK97 555 aa12□□□□□ -0.49
APOC1-209ENST00000592885 A8MXE2 369 aa12□□□□□ -0.49
APOC1-209ENST00000592885 B4DXG7 233 aa12□□□□□ -0.49
APOC1-209ENST00000592885 COPEO14579 308 aa12□□□□□ -0.49
APOC1-209ENST00000592885 PDPK1O15530 556 aa12□□□□□ -0.49
APOC1-209ENST00000592885 NME6O75414 186 aaPredicted RBP12□□□□□ -0.49
APOC1-209ENST00000592885 KCNH1O95259 989 aa12□□□□□ -0.49
APOC1-209ENST00000592885 CHEK2O96017 543 aa12□□□□□ -0.49
APOC1-209ENST00000592885 DDX5P17844 614 aaKnown RBP12□□□□□ -0.49
APOC1-209ENST00000592885 HK1P19367 917 aa12□□□□□ -0.49
APOC1-209ENST00000592885 KIAA0040Q15053 153 aa12□□□□□ -0.49
APOC1-209ENST00000592885 PRSS53Q2L4Q9 553 aa12□□□□□ -0.49
APOC1-209ENST00000592885 VPS26BQ4G0F5 336 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms