RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SNPHO15079 494 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 CBR3O75828 277 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 KCNH1O95259 989 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 IL33O95760 270 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 C6orf47O95873 294 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 HPNP05981 417 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 CYP4B1P13584 511 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 ENDOUP21128 410 aaKnown RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 EPHA3P29320 983 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 PTPN6P29350 595 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 SMSP52788 366 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 PSMD4P55036 377 aaKnown RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 TOMM20Q15388 145 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 WLSQ5T9L3 541 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 HIST2H2BCQ6DN03 193 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 OGFOD2Q6N063 350 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 MFSD12Q6NUT3 480 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 ZCCHC12Q6PEW1 402 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 XKRXQ6PP77 449 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 NCCRP1Q6ZVX7 275 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 WDSUB1Q8N9V3 476 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 SLC16A11Q8NCK7 471 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 OR8J2Q8NGG1 315 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 PSMA8Q8TAA3 256 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 GPR151Q8TDV0 419 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 PHF10Q8WUB8 498 aaKnown RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 RNF138Q8WVD3 245 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 PIK3R3Q92569 461 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 SLC9A6Q92581 669 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 SARAFQ96BY9 339 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 FAM120BQ96EK7 910 aaKnown RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 GIMAP5Q96F15 307 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 C16orf58Q96GQ5 468 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 DPY30Q9C005 99 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 TP63Q9H3D4 680 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 WDR55Q9H6Y2 383 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 CXorf36Q9H7Y0 433 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 PNPLA3Q9NST1 481 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 ZCCHC3Q9NUD5 404 aaKnown RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 SPRR3Q9UBC9 169 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 MRTO4Q9UKD2 239 aaKnown RBP8.39□□□□□ -1.07
DNMT1-223ENST00000591239 WIF1Q9Y5W5 379 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 DCHS2Q6V1P9 2916 aa8.39□□□□□ -1.07
DNMT1-223ENST00000591239 FREM3P0C091 2139 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 GOLGA8QA0A0J9YX86 632 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 GOLGA8OA6NCC3 632 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 FIGNL2A6NMB9 653 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 HMGB1P1B2RPK0 211 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 GOLGA8NF8WBI6 632 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ANKRD28O15084 1053 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 CFLARO15519 480 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 NKX2-2O95096 273 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 IGKV1D-16P01601 117 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 HMGN2P05204 90 aaKnown RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ALDOCP09972 364 aaKnown RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 NUDT7P0C024 238 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ACP2P11117 423 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 AGAP20933 346 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ACVR2AP27037 513 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 COL8A1P27658 744 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 EVI2BP34910 448 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 RFX3P48380 749 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 CCT3P49368 545 aaKnown RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 GAS1P54826 345 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 HBA1P69905 142 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ART3Q13508 389 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 DUSP5Q16690 384 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 SPDYE7PQ495Y7 208 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 EIPR1Q53HC9 387 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 TMEM211Q6ICI0 200 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 OR5M10Q6IEU7 315 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 OR4F3Q6IEY1 312 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ZNF585AQ6P3V2 769 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 SPATA19Q7Z5L4 167 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 PLCZ1Q86YW0 608 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 MARVELD2Q8N4S9 558 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 FAM83FQ8NEG4 500 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 FBXO30Q8TB52 745 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 PIWIL2Q8TC59 973 aaKnown RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 TESCQ96BS2 214 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 RMND5BQ96G75 393 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 YIPF4Q9BSR8 244 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 TMUB1Q9BVT8 246 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 NEUROD4Q9HD90 331 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 SERHLQ9NQF3 203 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 FLRT3Q9NZU0 649 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 ABCG2Q9UNQ0 655 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 UNC79Q9P2D8 2635 aa8.38□□□□□ -1.07
DNMT1-223ENST00000591239 NUP214P35658 2090 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-223ENST00000591239 C15orf38-AP3S2A0A0A6YYH1 394 aa8.37□□□□□ -1.07
DNMT1-223ENST00000591239 RNASET2O00584 256 aaKnown RBP8.37□□□□□ -1.07
DNMT1-223ENST00000591239 ZNF195O14628 629 aa8.37□□□□□ -1.07
DNMT1-223ENST00000591239 SCO2O43819 266 aa8.37□□□□□ -1.07
DNMT1-223ENST00000591239 FADS1O60427 444 aa8.37□□□□□ -1.07
DNMT1-223ENST00000591239 WDR1O75083 606 aa8.37□□□□□ -1.07
DNMT1-223ENST00000591239 SASH3O75995 380 aa8.37□□□□□ -1.07
DNMT1-223ENST00000591239 KCNK2O95069 426 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms