RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 B4GALT7Q9UBV7 327 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 SH3BGRL2Q9UJC5 107 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 C19orf53Q9UNZ5 99 aaPredicted RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 GPR55Q9Y2T6 319 aaPredicted RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 OR10H1Q9Y4A9 318 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 PCDHB14Q9Y5E9 798 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 GTF3C1Q12789 2109 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 NINQ8N4C6 2090 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 DIDO1Q9BTC0 2240 aaKnown RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 SLCO1B7G3V0H7 640 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 PLOD2O00469 737 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CCL21O00585 134 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 PRRG2O14669 202 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 SCAMP2O15127 329 aaKnown RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 REM1O75628 298 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 PDE9AO76083 593 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 GLSO94925 669 aaPredicted RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 FAM107AO95990 144 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ABCB1P08183 1280 aaPredicted RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 TROVE2P10155 538 aaKnown RBP eCLIP9.51□□□□□ -0.89
SDF2-208ENST00000589788 PRPS1L1P21108 318 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 IL12BP29460 328 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CA7P43166 264 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 MAGEA5P43359 124 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 GIPRP48546 466 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 MASP1P48740 699 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 MANFP55145 182 aaKnown RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 CORO7P57737 925 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 PDE7AQ13946 482 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 PTGR1Q14914 329 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ZNHIT3Q15649 155 aaPredicted RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 SMU1Q2TAY7 513 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ZNF385BQ569K4 471 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CMPK2Q5EBM0 449 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CPTPQ5TA50 214 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 TMEM198Q66K66 360 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CGB2Q6NT52 195 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 MTFR2Q6P444 385 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ARHGAP11AQ6P4F7 1023 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 NUP54Q7Z3B4 507 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 SZRD1Q7Z422 152 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CPLX4Q7Z7G2 160 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 WDR75Q8IWA0 830 aaKnown RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 SLC44A2Q8IWA5 706 aaPredicted RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 OR2L13Q8N349 312 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 FAM109AQ8N4B1 249 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 TMEM251Q8N6I4 163 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 OR7A2PQ8NGA2 310 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 RELTQ969Z4 430 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ELP4Q96EB1 424 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ZNF597Q96LX8 424 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 VSTM2LQ96N03 204 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 SIKE1Q9BRV8 207 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ZFP64Q9NPA5 681 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 ACSS1Q9NUB1 689 aaPredicted RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 ATAD3AQ9NVI7 634 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 PNPOQ9NVS9 261 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 SUCOQ9UBS9 1254 aaKnown RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 ATP6V1HQ9UI12 483 aa9.51□□□□□ -0.89
SDF2-208ENST00000589788 CNOT11Q9UKZ1 510 aaKnown RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 USP9XQ93008 2570 aaPredicted RBP9.51□□□□□ -0.89
SDF2-208ENST00000589788 A0A1B0GTH9 108 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 UPK1AO00322 258 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 GNB5O14775 395 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 TO15178 435 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 KLF4O43474 513 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 NME6O75414 186 aaPredicted RBP9.5□□□□□ -0.89
SDF2-208ENST00000589788 SNX4O95219 450 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 LDLRP01130 860 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 IFI6P09912 130 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 CT45A8P0DMV1 189 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 CT45A9P0DMV2 189 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 PTGS2P35354 604 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 MRPS22P82650 360 aaKnown RBP9.5□□□□□ -0.89
SDF2-208ENST00000589788 EMX2Q04743 252 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 FOXO1Q12778 655 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 SLC10A1Q14973 349 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 C3AR1Q16581 482 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 HYAL4Q2M3T9 481 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 CT45A2Q5DJT8 189 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 BICRALQ6AI39 1079 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 MYO7BQ6PIF6 2116 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 Q6ZPB1 254 aaPredicted RBP9.5□□□□□ -0.89
SDF2-208ENST00000589788 LARP4Q71RC2 724 aaKnown RBP eCLIP9.5□□□□□ -0.89
SDF2-208ENST00000589788 LSRQ86X29 649 aaPredicted RBP9.5□□□□□ -0.89
SDF2-208ENST00000589788 CEP70Q8NHQ1 597 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 TMBIM1Q969X1 311 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 TMCO6Q96DC7 493 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 ANAPC16Q96DE5 110 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 RILPQ96NA2 401 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 COL21A1Q96P44 957 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 CCT8L2Q96SF2 557 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 ANGPTL4Q9BY76 406 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 TMPRSS13Q9BYE2 586 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 NUF2Q9BZD4 464 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 LDAHQ9H6V9 325 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 EXO5Q9H790 373 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 AKTIPQ9H8T0 292 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 ZDHHC11Q9H8X9 412 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms