RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 C16orf45Q96MC5 204 aaPredicted RBP13.52□□□□□ -0.25
SF3A2-204ENST00000589118 NSUN5Q96P11 429 aaKnown RBP13.52□□□□□ -0.25
SF3A2-204ENST00000589118 NPAS1Q99742 590 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 NTMT1Q9BV86 223 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 ACTR6Q9GZN1 396 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 RAB17Q9H0T7 212 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 PSD3Q9NYI0 1048 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 PPP4R1LQ9P1A2 415 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 LIPT1Q9Y234 373 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 MAGED1Q9Y5V3 778 aaPredicted RBP13.52□□□□□ -0.25
SF3A2-204ENST00000589118 ALPK2Q86TB3 2170 aa13.52□□□□□ -0.25
SF3A2-204ENST00000589118 C1orf226A1L170 272 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 PPP6CO00743 305 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 CLOCKO15516 846 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 CLDN9O95484 217 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 IL12BP29460 328 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 IDUAP35475 653 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 ILF2Q12905 390 aaKnown RBP13.51□□□□□ -0.25
SF3A2-204ENST00000589118 SGCBQ16585 318 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 CHRFAM7AQ494W8 412 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 ZNF628Q5EBL2 1059 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 C3orf62Q6ZUJ4 267 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 COMMD6Q7Z4G1 85 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 SLC44A2Q8IWA5 706 aaPredicted RBP13.51□□□□□ -0.25
SF3A2-204ENST00000589118 ZNF619Q8N2I2 560 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 METTL4Q8N3J2 472 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 OR9A2Q8NGT5 310 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 RNF138Q8WVD3 245 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 CDKL2Q92772 493 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 ATP6V1E2Q96A05 226 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 HBEGFQ99075 208 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 DPH5Q9H2P9 285 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 C12orf49Q9H741 205 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 PFDN4Q9NQP4 134 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 PLSCR4Q9NRQ2 329 aa13.51□□□□□ -0.25
SF3A2-204ENST00000589118 UTP11Q9Y3A2 253 aaKnown RBP13.51□□□□□ -0.25
SF3A2-204ENST00000589118 A8MV72 311 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 TLX2O43763 284 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 ABCB7O75027 752 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 SEMA3DO95025 777 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 F12P00748 615 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 DANCRP0C864 163 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 TSPAN8P19075 237 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 SPRP35270 261 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 GALNT1Q10472 559 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 SH2D4BQ5SQS7 431 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 GRTP1Q5TC63 336 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 LGSNQ5TDP6 509 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 FRG2Q64ET8 278 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 MARCH3Q86UD3 253 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 GGNQ86UU5 652 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 DUSP19Q8WTR2 217 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 CAVIN3Q969G5 261 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 GTPBP3Q969Y2 492 aaKnown RBP13.5□□□□□ -0.25
SF3A2-204ENST00000589118 FRG2BQ96QU4 278 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 PRRG4Q9BZD6 226 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 ZBTB26Q9HCK0 441 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 PRODH2Q9UF12 536 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 SLC12A4Q9UP95 1085 aa13.5□□□□□ -0.25
SF3A2-204ENST00000589118 FREM1Q5H8C1 2179 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 EIF1AYO14602 144 aaKnown RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 PDYNP01213 254 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 ALDOAP04075 364 aaKnown RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 GSTA2P09210 222 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 KRT20P35900 424 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 EIF1AXP47813 144 aaKnown RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 PNLIPRP2P54317 469 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 EFR3AQ14156 821 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 MFSD12Q6NUT3 480 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 UHMK1Q8TAS1 419 aaKnown RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 SMAP2Q8WU79 429 aaPredicted RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 HTRA1Q92743 480 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 S100PBPQ96BU1 408 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 PHF21BQ96EK2 531 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 TRMT61AQ96FX7 289 aaKnown RBP13.49□□□□□ -0.25
SF3A2-204ENST00000589118 VSTM2LQ96N03 204 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 BTBD9Q96Q07 612 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 ADAM29Q9UKF5 820 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 ACOT9Q9Y305 439 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 ZNF175Q9Y473 711 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 ZNF780BQ9Y6R6 833 aa13.49□□□□□ -0.25
SF3A2-204ENST00000589118 IGHV4-30-2A0A087WSY4 118 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 HMX2A2RU54 273 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 SSX4O60224 188 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 FADS1O60427 444 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 UGDHO60701 494 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 C2P06681 752 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 CHN1P15882 459 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 CRABP2P29373 138 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 EVI2BP34910 448 aa13.48□□□□□ -0.25
SF3A2-204ENST00000589118 RFX3P48380 749 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms