RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CHRM4P08173 479 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 HOXB6P17509 224 aaKnown RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 ITPKBP27987 946 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 GABRA3P34903 492 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 TRHRP34981 398 aaPredicted RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 PSPHP78330 225 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 TLE3Q04726 772 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 BROXQ5VW32 411 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 HLA-DQA1Q5Y7H0 255 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 FCRLBQ6BAA4 426 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 NPSR1Q6W5P4 371 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 C16orf47Q6ZP98 133 aaPredicted RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 C16orf62Q7Z3J2 963 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 KBTBD2Q8IY47 623 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 CLEC1AQ8NC01 280 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 GPR151Q8TDV0 419 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 PIK3R3Q92569 461 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 STMN2Q93045 179 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 FER1L6-AS2Q96M78 137 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 SDF2Q99470 211 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 DEFB126Q9BYW3 111 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 ZNF350Q9GZX5 532 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 SAP130Q9H0E3 1048 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 SLC38A1Q9H2H9 487 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 RUBCNLQ9H714 662 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 CPNE5Q9HCH3 593 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 S100A14Q9HCY8 104 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 POLE3Q9NRF9 147 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 CCM2LQ9NUG4 571 aaPredicted RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 RPS6KA6Q9UK32 745 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 SAMD4AQ9UPU9 718 aaKnown RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 POLHQ9Y253 713 aa13.8□□□□□ -0.2
NFIX-208ENST00000587260 GPC6Q9Y625 555 aaPredicted RBP13.8□□□□□ -0.2
NFIX-208ENST00000587260 DHRS12A0PJE2 317 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 M0QX08 132 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 H6PDO95479 791 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 SERPINA1P01009 418 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 SERPINA7P05543 415 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 ITGA3P26006 1051 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 SLC7A1P30825 629 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 POU6F2P78424 691 aaPredicted RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 MRPS22P82650 360 aaKnown RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 ACACAQ13085 2346 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 DEFB109BQ30KR1 87 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 CYP27C1Q4G0S4 372 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 SLC44A2Q8IWA5 706 aaPredicted RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 ADGRG5Q8IZF4 528 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 SIRT6Q8N6T7 355 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 COX18Q8N8Q8 333 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 ZNF441Q8N8Z8 693 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 PAPD5Q8NDF8 572 aaKnown RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 NUBPLQ8TB37 319 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 BRIX1Q8TDN6 353 aaKnown RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 CANT1Q8WVQ1 401 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 TP53INP1Q96A56 240 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 TAMM41Q96BW9 452 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 ZNF607Q96SK3 696 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 UGT2B28Q9BY64 529 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 NXF5Q9H1B4 397 aaKnown RBP13.79□□□□□ -0.2
NFIX-208ENST00000587260 DCLRE1BQ9H816 532 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 Q9N2J8 555 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 ARMC1Q9NVT9 282 aa13.79□□□□□ -0.2
NFIX-208ENST00000587260 EXPH5Q8NEV8 1989 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 FRG2CA6NGY1 282 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 TMEM229AB2RXF0 380 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 TAF4O00268 1085 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 WWP2O00308 870 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 TO15178 435 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 STX11O75558 287 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 SERPINB7O75635 380 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 KRT36O76013 467 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 ZFAND5O76080 213 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 KCNK2O95069 426 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 MFN2O95140 757 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 ICAM2P13598 275 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 PSMA4P25789 261 aaKnown RBP13.78□□□□□ -0.2
NFIX-208ENST00000587260 AQP1P29972 269 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 PIGAP37287 484 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 RFX3P48380 749 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 ST13P50502 369 aaKnown RBP13.78□□□□□ -0.2
NFIX-208ENST00000587260 ERFP50548 548 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 NR0B1P51843 470 aaKnown RBP13.78□□□□□ -0.2
NFIX-208ENST00000587260 SELENOWP63302 87 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 AIMP2Q13155 320 aaKnown RBP13.78□□□□□ -0.2
NFIX-208ENST00000587260 RAPSNQ13702 412 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 CRTC2Q53ET0 693 aaPredicted RBP13.78□□□□□ -0.2
NFIX-208ENST00000587260 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 LRRC23Q53EV4 343 aaPredicted RBP13.78□□□□□ -0.2
NFIX-208ENST00000587260 DCST2Q5T1A1 773 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 TCTN3Q6NUS6 607 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 FRRS1Q6ZNA5 592 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 GALNT10Q86SR1 603 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 KRT73Q86Y46 540 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 PRR22Q8IZ63 422 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 OR4N2Q8NGD1 307 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 PYDC1Q8WXC3 89 aa13.78□□□□□ -0.2
NFIX-208ENST00000587260 SLCO4A1Q96BD0 722 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms