RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ANKRA2	Q9H9E1	313 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GALNT9	Q9HCQ5	603 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ATAD3A	Q9NVI7	634 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FAM120C	Q9NX05	1096 aa	Known RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ALKBH4	Q9NXW9	302 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SH3BP4	Q9P0V3	963 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FIS1	Q9Y3D6	152 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PTGDR2	Q9Y5Y4	395 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ARHGAP21	Q5T5U3	1957 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708		A0A0G2JNJ9	132 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ENO4	A6NNW6	628 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TMEM233	B4DJY2	109 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C19orf84	I3L1E1	186 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LINC01387	J3KSC0	135 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KCNH1	O95259	989 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SERPINE1	P05121	402 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRF1	P14222	555 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRPS1L1	P21108	318 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CHM	P24386	653 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EVI2B	P34910	448 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GAS1	P54826	345 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GFRA1	P56159	465 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	DSCR4	P56555	118 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C21orf58	P58505	322 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRR5	P85299	388 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GAB1	Q13480	694 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RCAN2	Q14206	197 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GANAB	Q14697	944 aa	Known RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GALNTL6	Q49A17	601 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EIPR1	Q53HC9	387 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C6orf136	Q5SQH8	315 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MEX3B	Q6ZN04	569 aa	Known RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZNF551	Q7Z340	670 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EXOC3L1	Q86VI1	746 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LRRC34	Q8IZ02	419 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR14L1P	Q8NHC6	308 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PSMA8	Q8TAA3	256 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SERHL	Q9NQF3	203 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GIN1	Q9NXP7	522 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ASIC5	Q9NY37	505 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TAS2R10	Q9NYW0	307 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TNFRSF10D	Q9UBN6	386 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708		Q9UFV3	132 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KCNN3	Q9UGI6	736 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	6e-7	■□□□□ 9.2
CDK5RAP3-222	ENST00000581708	ZDHHC2	Q9UIJ5	367 aa		11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708		V9GYY5	206 aa	Predicted RBP	11.46	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.46	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PDZD2	O15018	2839 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HCFC1	P51610	2035 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MBD3L3	A6NE82	208 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DVL2	O14641	736 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SCAMP2	O15127	329 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EMC8	O43402	210 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	AKAP10	O43572	662 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FADS1	O60427	444 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NKX2-2	O95096	273 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	IL18BP	O95998	194 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	IL2RA	P01589	272 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NGFR	P08138	427 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DHRS4L1	P0CG22	281 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CYP4B1	P13584	511 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CREB1	P16220	341 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ADH7	P40394	386 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HSPB3	Q12988	150 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GLYR1	Q49A26	553 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DESI1	Q6ICB0	168 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZCCHC23	Q6ZST2	131 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	IFNE	Q86WN2	208 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF295-AS1	Q8N0V1	137 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FADS6	Q8N9I5	356 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR4N2	Q8NGD1	307 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GFM2	Q969S9	779 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EFHD2	Q96C19	240 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	WDYHV1	Q96HA8	205 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MS4A4E	Q96PG1	132 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PTGES2	Q9H7Z7	377 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	BAIAP2L1	Q9UHR4	511 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HAO1	Q9UJM8	370 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CAMK2A	Q9UQM7	478 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EIF3L	Q9Y262	564 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SLC6A5	Q9Y345	797 aa		11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	INTS1	Q8N201	2190 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OTOG	Q6ZRI0	2925 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	IGLV3-32	A0A0A0MS00	114 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FAM90A27P	A6NNH2	459 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SYT5	O00445	386 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PEX11A	O75192	247 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	KRT16	P08779	473 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ARRB2	P32121	409 aa		11.44	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GABRA3	P34903	492 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms