RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 MKRN2Q9H000 416 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 APMAPQ9HDC9 416 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 OR1A2Q9Y585 309 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 PRAMEF2O60811 474 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 SYPP08247 313 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ETV4P43268 484 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ZNF252P-AS1Q0IIN9 211 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 SPCS2Q15005 226 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 LETMD1Q6P1Q0 360 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 METTL2BQ6P1Q9 378 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ZNF619Q8N2I2 560 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ESX1Q8N693 406 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ELP4Q96EB1 424 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 IL17FQ96PD4 163 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 PITX2Q99697 317 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 VRK1Q99986 396 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 TCEAL7Q9BRU2 100 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 TSPAN10Q9H1Z9 355 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 FAM221BA6H8Z2 402 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 GLTPD2A6NH11 291 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 EIF3FO00303 357 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DCNP07585 359 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 HTR6P50406 440 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 SGSHP51688 502 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 VEZF1Q14119 521 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 EIF2B1Q14232 305 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DCP2Q8IU60 420 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DHRS4Q9BTZ2 278 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 SLC12A9Q9BXP2 914 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 CNOT2Q9NZN8 540 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 GMDSO60547 372 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 SSTR4P31391 388 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 STK19P49842 368 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 PRPS1P60891 318 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 FPGSQ05932 587 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 TP53I3Q53FA7 332 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DNAJA3Q96EY1 480 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 PLEKHA3Q9HB20 300 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 CD68P34810 354 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 RAB5CP51148 216 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 RAB40BQ12829 278 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 ELOCQ15369 112 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 GTDC1Q4AE62 458 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 GRASPQ7Z6J2 395 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 CYP8B1Q9UNU6 501 aa13.78□□□□□ -0.2
CSNK1D-217ENST00000581241 CFIP05156 583 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 BDKRB2P30411 391 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 THBS2P35442 1172 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 INHBCP55103 352 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 GALK2Q01415 458 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 EMX1Q04741 257 aaPredicted RBP13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 UBE2NLQ5JXB2 153 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 PCYT2Q99447 389 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 DNTTIP1Q9H147 329 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 INSL6Q9Y581 213 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 SRPX2O60687 465 aaPredicted RBP13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 SNAPINO95295 136 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 RAB3DO95716 219 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 BPIP17213 487 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 COMMD6Q7Z4G1 85 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 FAM109AQ8N4B1 249 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 OR1J4Q8NGS1 313 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 LILRB4Q8NHJ6 448 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 MUL1Q969V5 352 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 DPH1Q9BZG8 443 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 RIMS3Q9UJD0 308 aa13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 COL1A1P02452 1464 aaPredicted RBP13.77□□□□□ -0.2
CSNK1D-217ENST00000581241 OR6C6A6NF89 314 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 SYT7O43581 403 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 BRINP1O60477 761 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 F2P00734 622 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 RAC2P15153 192 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 RAB4BP61018 213 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 DEFB134Q4QY38 66 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 NPWQ8N729 165 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 GON7Q9BXV9 100 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 MFFQ9GZY8 342 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 WDR6Q9NNW5 1121 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 MEGF11A6BM72 1044 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 MT-ND4P03905 459 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 POU3F4P49335 361 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 SNU13P55769 128 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 CXCR4P61073 352 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 DAZLQ92904 295 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 NT5C3BQ969T7 300 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF778Q96MU6 729 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 IL21RQ9HBE5 538 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 AK6Q9Y3D8 172 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 NAALAD2Q9Y3Q0 740 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 CTXN1P60606 82 aa13.77□□□□□ -0.21
CSNK1D-217ENST00000581241 GALEQ14376 348 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms