RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 C16orf58Q96GQ5 468 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LCORQ96JN0 433 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR7D2Q96RA2 312 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CDRT15Q96T59 188 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC39A3Q9BRY0 314 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 WWTR1Q9GZV5 400 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SAP130Q9H0E3 1048 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 IL1RL2Q9HB29 575 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF160Q9HCG1 818 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 A4GALTQ9NPC4 353 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF71Q9NQZ8 489 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MYOTQ9UBF9 498 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 BCAP29Q9UHQ4 241 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FAF1Q9UNN5 650 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LIPT1Q9Y234 373 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 POLHQ9Y253 713 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DTX4Q9Y2E6 619 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRORSD1PA6NEY8 169 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRKNO60260 465 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CEACAM4O75871 244 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DNAJC8O75937 253 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ALOX5P09917 674 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ACP2P11117 423 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRF1P14222 555 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HTR1EP28566 365 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TRHRP34981 398 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SOAT1P35610 550 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PIGAP37287 484 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC7A2P52569 658 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MTPNP58546 118 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CDC20Q12834 499 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SELPLGQ14242 412 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNHIT3Q15649 155 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MAPK11Q15759 364 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DUSP5Q16690 384 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SAMD4BQ5PRF9 694 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ERICH5Q6P6B1 374 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PTOV1Q86YD1 416 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC30A8Q8IWU4 369 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR52E4Q8NGH9 312 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR10A6Q8NH74 314 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ADAMTS15Q8TE58 950 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 REXO5Q96IC2 774 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC35G5Q96KT7 338 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TRNT1Q96Q11 434 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ECSITQ9BQ95 431 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 BTBD2Q9BX70 525 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR51I1Q9H343 314 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TRIM45Q9H8W5 580 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 BCL2L10Q9HD36 194 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 POLE3Q9NRF9 147 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TRBV11-1A0A0K0K1C0 115 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PRAMEF27A3QJZ7 478 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CDC14CA4D256 554 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 FAM220BPB1ANY3 271 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NADKO95544 446 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ARAFP10398 606 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ETFAP13804 333 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CRATP43155 626 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KHKP50053 298 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MLF1P58340 268 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DSTNP60981 165 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MXRA7P84157 204 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GNA13Q14344 377 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF630Q2M218 657 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 LYPD8Q6UX82 237 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NPSR1Q6W5P4 371 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DNAJC14Q6Y2X3 702 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CCDC80Q76M96 950 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DND1Q8IYX4 353 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CLEC1AQ8NC01 280 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DOK4Q8TEW6 326 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC38A5Q8WUX1 472 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NTNG2Q96CW9 530 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ABHD17AQ96GS6 310 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MAGED4Q96JG8 741 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SDF2Q99470 211 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ITPAQ9BY32 194 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DEFB126Q9BYW3 111 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 LHPPQ9H008 270 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NXF5Q9H1B4 397 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ALG2Q9H553 416 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 Q9N2J8 555 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 YARS2Q9Y2Z4 477 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 L3MBTL1Q9Y468 752 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KCNMB2Q9Y691 235 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KCNE3Q9Y6H6 103 aa10.27□□□□□ -0.77
CDK5RAP3-204ENST00000577664 A0A0G2JPF8 293 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 A8MVJ9 347 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HNRNPCL2B2RXH8 293 aa10.26□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HNRNPCL3B7ZW38 293 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms