RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 CD63P08962 238 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 NUDT7P0C024 238 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ARAFP10398 606 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 NR2F1P10589 423 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CPMP14384 443 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 MATN1P21941 496 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 MVDP53602 400 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 AQP4P55087 323 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 OLR1P78380 273 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 HPCAP84074 193 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 STX4Q12846 297 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 BIKQ13323 160 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ZNF169Q14929 603 aaPredicted RBP9.44□□□□□ -0.9
SS18-207ENST00000577636 CEBPEQ15744 281 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 PRTGQ2VWP7 1150 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 NKAIN1Q4KMZ8 207 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CYBRD1Q53TN4 286 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 COX20Q5RI15 118 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 RHBDD2Q6NTF9 364 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 TNFAIP8L2Q6P589 184 aaPredicted RBP9.44□□□□□ -0.9
SS18-207ENST00000577636 FAM180AQ6UWF9 173 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 TMEM107Q6UX40 140 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 LINC00696Q6ZRV3 163 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 SHISA6Q6ZSJ9 500 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CBLL1Q75N03 491 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ZDHHC13Q8IUH4 622 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ZDHHC21Q8IVQ6 265 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ZNF595Q8IYB9 648 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CA13Q8N1Q1 262 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 C10orf111Q8N326 155 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 NUP43Q8NFH3 380 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 OR9A4Q8NGU2 314 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 MAL2Q969L2 176 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 TBC1D20Q96BZ9 403 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CNRIP1Q96F85 164 aaPredicted RBP9.44□□□□□ -0.9
SS18-207ENST00000577636 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 DOHHQ9BU89 302 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 EPS8L2Q9H6S3 715 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 COQ10BQ9H8M1 238 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 SIRT3Q9NTG7 399 aaPredicted RBP9.44□□□□□ -0.9
SS18-207ENST00000577636 EXD2Q9NVH0 621 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 CALML5Q9NZT1 146 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 FBXL4Q9UKA2 621 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ERVK-11Q9UQG0 969 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 LIPT1Q9Y234 373 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 MRPS2Q9Y399 296 aaKnown RBP9.44□□□□□ -0.9
SS18-207ENST00000577636 PCDHGB3Q9Y5G1 929 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 ORC6Q9Y5N6 252 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 PCM1Q15154 2024 aa9.44□□□□□ -0.9
SS18-207ENST00000577636 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SEC16AO15027 2179 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 A0A0A6YYC8 382 aaPredicted RBP9.43□□□□□ -0.9
SS18-207ENST00000577636 TRGV8A0A0C4DH27 118 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 G3V2T6 193 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 H0YIG0 161 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 I3L1I5 382 aaPredicted RBP9.43□□□□□ -0.9
SS18-207ENST00000577636 CHST10O43529 356 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 ASNA1O43681 348 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SOX30O94993 753 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 MT-ND1P03886 318 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 BCHEP06276 602 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 STSP08842 583 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 MSL3P1P0C860 447 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 COX6B1P14854 86 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 UQCRBP14927 111 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 NT5EP21589 574 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 AQP1P29972 269 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 MC3RP41968 323 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 CLCN2P51788 898 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 CRISP3P54108 245 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 ARSFP54793 590 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 CASP9P55211 416 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SELENOWP63302 87 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SLC13A2Q13183 592 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 IFI44LQ53G44 452 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SFT2D3Q587I9 215 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
SS18-207ENST00000577636 HMBOX1Q6NT76 420 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 TLDC1Q6P9B6 456 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SLC44A2Q8IWA5 706 aaPredicted RBP9.43□□□□□ -0.9
SS18-207ENST00000577636 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 HORMAD2Q8N7B1 307 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 OR1N1Q8NGS0 311 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 OR9A2Q8NGT5 310 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 BBS10Q8TAM1 723 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 ADAMTS15Q8TE58 950 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 XAGE5Q8WWM1 108 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 PROX1Q92786 737 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 ELP4Q96EB1 424 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 MVB12AQ96EY5 273 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 MMABQ96EY8 250 aaPredicted RBP9.43□□□□□ -0.9
SS18-207ENST00000577636 THOC3Q96J01 351 aaKnown RBP9.43□□□□□ -0.9
SS18-207ENST00000577636 LURAP1Q96LR2 239 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 ZNF681Q96N22 645 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 ZNF285Q96NJ3 590 aa9.43□□□□□ -0.9
SS18-207ENST00000577636 MS4A4EQ96PG1 132 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms