RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 TUBA8Q9NY65 449 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-203ENST00000577442 NPIPA1Q9UND3 350 aa11.66□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ABCG2Q9UNQ0 655 aa11.66□□□□□ -0.54
CDK5RAP3-203ENST00000577442 DOPEY2Q9Y3R5 2298 aa11.66□□□□□ -0.54
CDK5RAP3-203ENST00000577442 TENM4Q6N022 2769 aa11.66□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PINLYPA6NC86 204 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 DUXAA6NLW8 204 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 FAM166BA8MTA8 275 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 UNC5CO95185 931 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CBX6O95503 412 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 AGR2O95994 175 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 AK1P00568 194 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CYP4B1P13584 511 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 GNLYP22749 145 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ELAVL4P26378 380 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CHI3L1P36222 383 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 RFX3P48380 749 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CLK3P49761 638 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ANXA11P50995 505 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 KCNK10P57789 538 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PHC1P78364 1004 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 TXNL4AP83876 142 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 KCNC4Q03721 635 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 FOXO1Q12778 655 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 DUSP5Q16690 384 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 TIGD2Q4W5G0 525 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 RNFT1Q5M7Z0 435 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 BICRALQ6AI39 1079 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 SLC16A11Q8NCK7 471 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 OR4N2Q8NGD1 307 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 OR9I1Q8NGQ6 314 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 RFWD2Q8NHY2 731 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 C16orf58Q96GQ5 468 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ITCHQ96J02 903 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 JSRP1Q96MG2 331 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 NODALQ96S42 347 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 SLC35A5Q9BS91 424 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 G6PC3Q9BUM1 346 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 BTBD2Q9BX70 525 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 TSPAN10Q9H1Z9 355 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 PIGUQ9H490 435 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 ZDHHC11Q9H8X9 412 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 QPCTLQ9NXS2 382 aa11.65□□□□□ -0.54
CDK5RAP3-203ENST00000577442 GXYLT2A0PJZ3 443 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 CCDC154A6NI56 674 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 LRRC3CA6NJW4 275 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 PYCARD-AS1I3L0S3 204 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 RFXANKO14593 260 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 SNPHO15079 494 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ASNA1O43681 348 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ICOSLGO75144 302 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 TRIM3O75382 744 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ATP6V1C1P21283 382 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 EVI2BP34910 448 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 UQCRFS1P47985 274 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 KHKP50053 298 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ARFIP2P53365 341 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 MRPL49Q13405 166 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 RCAN2Q14206 197 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 METTL21CQ5VZV1 264 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 C6orf120Q7Z4R8 191 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 TMEM251Q8N6I4 163 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 MIPOL1Q8TD10 442 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 RNF138Q8WVD3 245 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 PIK3R3Q92569 461 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 NEURL3Q96EH8 262 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 YIPF4Q9BSR8 244 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 TMEM120AQ9BXJ8 343 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ZNF703Q9H7S9 590 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 PROK2Q9HC23 129 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 WIF1Q9Y5W5 379 aa11.64□□□□□ -0.55
CDK5RAP3-203ENST00000577442 USP9YO00507 2555 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 NR5A2O00482 541 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 CDC40O60508 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 KCNK2O95069 426 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 UTS2O95399 124 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ANP32DO95626 131 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 KRT75O95678 551 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 NGFRP08138 427 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 MATN1P21941 496 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 MAGEA5P43359 124 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 MAGEA8P43361 318 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 TRPC1P48995 793 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 MAN2A2P49641 1150 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 CASP6P55212 293 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 AGKQ53H12 422 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 CMPK2Q5EBM0 449 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 C6orf10Q5SRN2 563 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ATAD3BQ5T9A4 648 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 SAXO2Q658L1 398 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 TIGD3Q6B0B8 471 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ARHGAP11AQ6P4F7 1023 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ANGPTL8Q6UXH0 198 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 ZNF621Q6ZSS3 439 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 OR1J4Q8NGS1 313 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 CDS1Q92903 461 aa11.63□□□□□ -0.55
CDK5RAP3-203ENST00000577442 SPDL1Q96EA4 605 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms