RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CT45A2Q5DJT8 189 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 PPP4R4Q6NUP7 873 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 C22orf34Q6ZV56 151 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 OR2M3Q8NG83 312 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 KCTD4Q8WVF5 259 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 VSTM2LQ96N03 204 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 NTMT1Q9BV86 223 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 AMBRA1Q9C0C7 1298 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 ZBTB26Q9HCK0 441 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 TAS2R9Q9NYW1 312 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 CPSF2Q9P2I0 782 aaKnown RBP11.99□□□□□ -0.49
COPS3-214ENST00000577246 CDC42EP3Q9UKI2 254 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 UTS2RQ9UKP6 389 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 MCTS1Q9ULC4 181 aaKnown RBP11.99□□□□□ -0.49
COPS3-214ENST00000577246 TMCO1Q9UM00 188 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 RNF115Q9Y4L5 304 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 DSCAMO60469 2012 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 OR2M5A3KFT3 312 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 H0YC42 278 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 PHF1O43189 567 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 SCO2O43819 266 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 DLX3O60479 287 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 ESRRBO95718 433 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 PLAUP00749 431 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 FAM157CP0CG43 387 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 IL11P20809 199 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 TPD52P55327 224 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 CLDN20P56880 219 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 CORO7P57737 925 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 GGTA1PQ4G0N0 100 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 ZNF628Q5EBL2 1059 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 SLC44A2Q8IWA5 706 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 CENPLQ8N0S6 344 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 OR52B6Q8NGF0 335 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 EFHD2Q96C19 240 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 TM4SF18Q96CE8 201 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 C1GALT1C1Q96EU7 318 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 CNRIP1Q96F85 164 aaPredicted RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 HS6ST2Q96MM7 605 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 ZNF681Q96N22 645 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 HDHD5Q9BXW7 423 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 SHCBP1LQ9BZQ2 653 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 ESRP2Q9H6T0 727 aaKnown RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 BRF2Q9HAW0 419 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 WHRNQ9P202 907 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 MRTO4Q9UKD2 239 aaKnown RBP11.98□□□□□ -0.49
COPS3-214ENST00000577246 NFU1Q9UMS0 254 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 SNX24Q9Y343 169 aa11.98□□□□□ -0.49
COPS3-214ENST00000577246 A0A1W2PP18 115 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 OR7A17O14581 309 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 ZSCAN12O43309 604 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 COQ9O75208 318 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 AQP8O94778 261 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 KLHL2O95198 593 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 SIX3O95343 332 aaPredicted RBP11.97□□□□□ -0.49
COPS3-214ENST00000577246 PSMB1P20618 241 aaKnown RBP11.97□□□□□ -0.49
COPS3-214ENST00000577246 CYP27C1Q4G0S4 372 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 SGO1Q5FBB7 561 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 EXOC3L1Q86VI1 746 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 MED12LQ86YW9 2145 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 CCDC116Q8IYX3 515 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 UHMK1Q8TAS1 419 aaKnown RBP11.97□□□□□ -0.49
COPS3-214ENST00000577246 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
COPS3-214ENST00000577246 MTBPQ96DY7 904 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
COPS3-214ENST00000577246 SLCO5A1Q9H2Y9 848 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 ALG2Q9H553 416 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 FOLH1BQ9HBA9 442 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 MED11Q9P086 117 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 SNX6Q9UNH7 406 aa11.97□□□□□ -0.49
COPS3-214ENST00000577246 CLOCKO15516 846 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 PLOD3O60568 738 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 SYNGR4O95473 234 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 C2P06681 752 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 CD3EP07766 207 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 PYGBP11216 843 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 ZNF17P17021 662 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 MPIP34949 423 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 ACVR1BP36896 505 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 EIF1AXP47813 144 aaKnown RBP11.96□□□□□ -0.49
COPS3-214ENST00000577246 PSMD4P55036 377 aaKnown RBP11.96□□□□□ -0.49
COPS3-214ENST00000577246 IRF9Q00978 393 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 DUSP2Q05923 314 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 GALNT1Q10472 559 aaPredicted RBP11.96□□□□□ -0.49
COPS3-214ENST00000577246 STX5Q13190 355 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 DECR1Q16698 335 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 NPSR1Q6W5P4 371 aa11.96□□□□□ -0.49
COPS3-214ENST00000577246 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms