RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FAPQ12884 760 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ILF2Q12905 390 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 STX5Q13190 355 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 EFR3AQ14156 821 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ETFDHQ16134 617 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ADAM5Q6NVV9 412 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 MILR1Q7Z6M3 343 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 TBC1D1Q86TI0 1168 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ATG4DQ86TL0 474 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 CTAGE3PQ8IX95 158 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 METTL4Q8N3J2 472 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 OR52B6Q8NGF0 335 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 OR6K3Q8NGY3 331 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 UHMK1Q8TAS1 419 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 TRPC4APQ8TEL6 797 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 DUSP19Q8WTR2 217 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 RNF138Q8WVD3 245 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 KCTD4Q8WVF5 259 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ATP6V1E2Q96A05 226 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 DTNBP1Q96EV8 351 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 STMN4Q9H169 189 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ADAM29Q9UKF5 820 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 SNX12Q9UMY4 172 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ACOT9Q9Y305 439 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 EMC9Q9Y3B6 208 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 TCRBV9S1A1TA0A576 114 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 FAM159BA6NKW6 160 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 EIF1AYO14602 144 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 SSX4O60224 188 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 GMFGO60234 142 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 PLGP00747 810 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 CD8AP01732 235 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 EVI2BP34910 448 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 KRT20P35900 424 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 EIF1AXP47813 144 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 ALDH18A1P54886 795 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 CTBP2P56545 445 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 MRPS25P82663 173 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 ZNF844Q08AG5 666 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 PGGHGQ32M88 737 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 ZNF628Q5EBL2 1059 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 NCMAPQ5T1S8 102 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 C6orf52Q5T4I8 152 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 GRTP1Q5TC63 336 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 FRG2Q64ET8 278 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 TTC19Q6DKK2 380 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 MFSD12Q6NUT3 480 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 C3orf62Q6ZUJ4 267 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 PAGE2Q7Z2X7 111 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 COMMD6Q7Z4G1 85 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 GGNQ86UU5 652 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 SLC44A2Q8IWA5 706 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 CENPLQ8N0S6 344 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 METTL25Q8N6Q8 603 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 PPM1NQ8N819 430 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 GBP7Q8N8V2 638 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 OR9A2Q8NGT5 310 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 RHEBL1Q8TAI7 183 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 GFM2Q969S9 779 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 FBXW5Q969U6 566 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 S100PBPQ96BU1 408 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 VSTM2LQ96N03 204 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 BTBD9Q96Q07 612 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 FRG2BQ96QU4 278 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 C19orf24Q9BVV8 132 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 BEX2Q9BXY8 128 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 C12orf49Q9H741 205 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 SAYSD1Q9NPB0 183 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 FARSBQ9NSD9 589 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 UTS2RQ9UKP6 389 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 PSME2Q9UL46 239 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 GPR52Q9Y2T5 361 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 RNF115Q9Y4L5 304 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 ZNF780BQ9Y6R6 833 aa9.04□□□□□ -0.96
NPLOC4-220ENST00000576940 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.04□□□□□ -0.967e-20■■■■□ 19.6
NPLOC4-220ENST00000576940 IGHV4-30-2A0A087WSY4 118 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 A0A1W2PP18 115 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 FAM234BA2RU67 622 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 SYCE1LA8MT33 242 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 LINC01387J3KSC0 135 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 KIF2AO00139 706 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 FADS1O60427 444 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 SS18L1O75177 396 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 GUCY1B2O75343 617 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 BCAS2O75934 225 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 ALDOAP04075 364 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 CD3EP07766 207 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 THBS1P07996 1170 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 CRABP2P29373 138 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 GALNT1Q10472 559 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 SH2D4BQ5SQS7 431 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 LGSNQ5TDP6 509 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 BEND4Q6ZU67 534 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 MARCH3Q86UD3 253 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 ZNF619Q8N2I2 560 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 ARIH2OSQ8N7S6 290 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 KBTBD8Q8NFY9 601 aa9.03□□□□□ -0.96
NPLOC4-220ENST00000576940 C1GALT1C1Q96EU7 318 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms