RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 THAP4Q8WY91 577 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 KLK6Q92876 244 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 C1QTNF3Q9BXJ4 246 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 CDCA4Q9BXL8 241 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 ALOXE3Q9BYJ1 711 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 SYT4Q9H2B2 425 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 EMC7Q9NPA0 242 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 RLIMQ9NVW2 624 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 POLHQ9Y253 713 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 ASB1Q9Y576 335 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 PRKCAP17252 672 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 HOXD9P28356 352 aaPredicted RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 FAM219BQ5XKK7 198 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 SIGIRRQ6IA17 410 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 ALKAL2Q6UX46 152 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 BCDIN3DQ7Z5W3 292 aaKnown RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 TMEM185AQ8NFB2 350 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR2L2Q8NH16 312 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 TM9SF4Q92544 642 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 FCRL1Q96LA6 429 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 CNN2Q99439 309 aaKnown RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 WDR26Q9H7D7 661 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 GSKIPQ9P0R6 139 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 MN1Q10571 1320 aaPredicted RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 FEZF1A0PJY2 475 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 GXYLT2A0PJZ3 443 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 HHLA1C9JL84 531 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 TCRBP04435 133 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 NPR2P20594 1047 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 PGDP52209 483 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 NKG7Q16617 165 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 B3GLCTQ6Y288 498 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 ZNF101Q8IZC7 436 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 CYB561A3Q8NBI2 242 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR6N2Q8NGY6 317 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 OR14C36Q8NHC7 312 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 WDR20Q8TBZ3 569 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 UBTD2Q8WUN7 234 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 YARS2Q9Y2Z4 477 aaKnown RBP12.4□□□□□ -0.42
PCDHGB3-201ENST00000576222 C1orf226A1L170 272 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 FZD7O75084 574 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 CNMDO75829 334 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 IFNA21P01568 189 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC1A3P43003 542 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 DBPQ10586 325 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 GLT8D1Q68CQ7 371 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ARHGAP11AQ6P4F7 1023 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 SERPINA12Q8IW75 414 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 L3MBTL4Q8NA19 623 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR4K14Q8NGD5 310 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZBED3Q96IU2 234 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM175Q9BSA9 504 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 FAM183AA6NL82 134 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 INPPL1O15357 1258 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 SMAD6O43541 496 aaKnown RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 PEX14O75381 377 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 NFATC1O95644 943 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 MC2RQ01718 297 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ID2Q02363 134 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACVR1Q04771 509 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 GAS6Q14393 721 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 MRPL10Q7Z7H8 261 aaKnown RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 NRROSQ86YC3 692 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF584Q8IVC4 421 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 KREMEN2Q8NCW0 462 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR5D16Q8NGK9 328 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC22A18Q96BI1 424 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 GABARAPL3Q9BY60 117 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 VNN3Q9NY84 501 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 NAALAD2Q9Y3Q0 740 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 PRMT2P55345 433 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 PCGF3Q3KNV8 242 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 SAXO2Q658L1 398 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 HBMQ6B0K9 141 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ULK3Q6PHR2 472 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 LRRC56Q8IYG6 542 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 WFIKKN2Q8TEU8 576 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ADAMTS14Q8WXS8 1223 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 RELTQ969Z4 430 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC25A36Q96CQ1 311 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 DPH1Q9BZG8 443 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 GSX2Q9BZM3 304 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ABCG4Q9H172 646 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEFF2Q9UIK5 374 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 PPT2Q9UMR5 302 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 RCE1Q9Y256 329 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 HEBP2Q9Y5Z4 205 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 AKR7A2O43488 359 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 TYRP14679 529 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 PDHA2P29803 388 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms