RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 OGFOD2Q6N063 350 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 MRGPRGQ86SM5 289 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 LRRC34Q8IZ02 419 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 SLC16A11Q8NCK7 471 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 OR1J4Q8NGS1 313 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 CEP70Q8NHQ1 597 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 NEIL3Q8TAT5 605 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 YIPF4Q9BSR8 244 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 RTN4RQ9BZR6 473 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 C3orf14Q9HBI5 128 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 SERHLQ9NQF3 203 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 ZCCHC3Q9NUD5 404 aaKnown RBP25.32■■□□□ 1.64
SCARF1-207ENST00000573867 NCOA6Q14686 2063 aaPredicted RBP25.32■■□□□ 1.64
SCARF1-207ENST00000573867 GOLGA8QA0A0J9YX86 632 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 GOLGA8OA6NCC3 632 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 GOLGA8NF8WBI6 632 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 ELAVL4P26378 380 aaKnown RBP25.31■■□□□ 1.64
SCARF1-207ENST00000573867 PHC1P78364 1004 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 MRPS22P82650 360 aaKnown RBP25.31■■□□□ 1.64
SCARF1-207ENST00000573867 DUSP5Q16690 384 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 PGS1Q32NB8 556 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 MTFR2Q6P444 385 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 CLECL1Q8IZS7 167 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 CDRT4Q8N9R6 151 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 SLC9A6Q92581 669 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 RMND5BQ96G75 393 aaPredicted RBP25.31■■□□□ 1.64
SCARF1-207ENST00000573867 PRPF18Q99633 342 aaKnown RBP25.31■■□□□ 1.64
SCARF1-207ENST00000573867 EXO5Q9H790 373 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 WIF1Q9Y5W5 379 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 SNX8Q9Y5X2 465 aa25.31■■□□□ 1.64
SCARF1-207ENST00000573867 ZNF195O14628 629 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 BCKDKO14874 412 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 FADS1O60427 444 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 TRAPPC6AO75865 159 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 HBA1P69905 142 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 DECR1Q16698 335 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 EIPR1Q53HC9 387 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 RPTNQ6XPR3 784 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 ZAR1Q86SH2 424 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 GALNT10Q86SR1 603 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 GPR151Q8TDV0 419 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 PHF10Q8WUB8 498 aaKnown RBP25.3■■□□□ 1.64
SCARF1-207ENST00000573867 TEX37Q96LM6 180 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 DPY30Q9C005 99 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 TP63Q9H3D4 680 aaPredicted RBP25.3■■□□□ 1.64
SCARF1-207ENST00000573867 AIG1Q9NVV5 245 aa25.3■■□□□ 1.64
SCARF1-207ENST00000573867 TTC36A6NLP5 189 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 HMGN2P05204 90 aaKnown RBP25.29■■□□□ 1.64
SCARF1-207ENST00000573867 EVI2BP34910 448 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 RFX3P48380 749 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 SLC9B1Q4ZJI4 515 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 WIPI1Q5MNZ9 446 aaPredicted RBP25.29■■□□□ 1.64
SCARF1-207ENST00000573867 RTL6Q6ICC9 239 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 OR5M10Q6IEU7 315 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 ZNF808Q8N4W9 903 aaPredicted RBP25.29■■□□□ 1.64
SCARF1-207ENST00000573867 NATD1Q8N6N6 113 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 FAM83FQ8NEG4 500 aaPredicted RBP25.29■■□□□ 1.64
SCARF1-207ENST00000573867 FBXL2Q9UKC9 423 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 SLC6A5Q9Y345 797 aa25.29■■□□□ 1.64
SCARF1-207ENST00000573867 SCO2O43819 266 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 SCN2BO60939 215 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 CCT3P49368 545 aaKnown RBP25.28■■□□□ 1.64
SCARF1-207ENST00000573867 NME5P56597 212 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 PRR5P85299 388 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 LASP1Q14847 261 aaKnown RBP25.28■■□□□ 1.64
SCARF1-207ENST00000573867 ZNF585AQ6P3V2 769 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 YRDCQ86U90 279 aaKnown RBP25.28■■□□□ 1.64
SCARF1-207ENST00000573867 PLCZ1Q86YW0 608 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 OR8J2Q8NGG1 315 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 FAM110BQ8TC76 370 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 SARAFQ96BY9 339 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 MAELQ96JY0 434 aaKnown RBP25.28■■□□□ 1.64
SCARF1-207ENST00000573867 GPATCH2Q9NW75 528 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 FBXO34Q9NWN3 711 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 ACAD8Q9UKU7 415 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 FAM215AQ9Y5M1 114 aa25.28■■□□□ 1.64
SCARF1-207ENST00000573867 TRPC5OSA6NMA1 111 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 CRYZQ08257 329 aaKnown RBP25.27■■□□□ 1.64
SCARF1-207ENST00000573867 TOMM20Q15388 145 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 LSM12Q3MHD2 195 aaKnown RBP25.27■■□□□ 1.64
SCARF1-207ENST00000573867 VPS26BQ4G0F5 336 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 DCST1Q5T197 706 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 APOOLQ6UXV4 268 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 OR5AK3PQ8NH89 298 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 TESCQ96BS2 214 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 SLCO1B3Q9NPD5 702 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 GPR45Q9Y5Y3 372 aa25.27■■□□□ 1.64
SCARF1-207ENST00000573867 HMGB1P1B2RPK0 211 aaPredicted RBP25.26■■□□□ 1.63
SCARF1-207ENST00000573867 C9JVG2 144 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 SLCO1B7G3V0H7 640 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 CFLARO15519 480 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 KCNK2O95069 426 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 KCNH1O95259 989 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 UTS2O95399 124 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 FREM3P0C091 2139 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 IL12AP29459 219 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 UFM1P61960 85 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 TP53BP2Q13625 1128 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 GRAMD1BQ3KR37 738 aa25.26■■□□□ 1.63
SCARF1-207ENST00000573867 SPANXN4Q5MJ08 99 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms