RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 GATA5Q9BWX5 397 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 POLDIP3Q9BY77 421 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 L2HGDHQ9H9P8 463 aa8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 CALHM2Q9HA72 323 aa8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 C3orf14Q9HBI5 128 aa8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 CRIM1Q9NZV1 1036 aa8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 SH3BP4Q9P0V3 963 aa8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 FOXD3Q9UJU5 478 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 CBLCQ9ULV8 474 aa8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 C19orf53Q9UNZ5 99 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 WBP11Q9Y2W2 641 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-212ENST00000573328 CLCA1A8K7I4 914 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 C17orf51A8MQB3 221 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 UPK1AO00322 258 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 PLOD2O00469 737 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 GMFGO60234 142 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 SPAG7O75391 227 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 KCNH1O95259 989 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 CPN1P15169 458 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 HK1P19367 917 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 PRPH2P23942 346 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 PRKAG1P54619 331 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 DSCR4P56555 118 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 VSNL1P62760 191 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 CYP27C1Q4G0S4 372 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 PLXDC2Q6UX71 529 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 LUZP2Q86TE4 346 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 KIF18BQ86Y91 864 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 UBQLNLQ8IYU4 475 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 GCNT2Q8N0V5 402 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 OR2L13Q8N349 312 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 OR2T11Q8NH01 316 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 GOT1L1Q8NHS2 421 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 FBXO30Q8TB52 745 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 GPR151Q8TDV0 419 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 TWIST2Q8WVJ9 160 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 SLC9A6Q92581 669 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 NRGNQ92686 78 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 CIDECQ96AQ7 238 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 INTS12Q96CB8 462 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 NTNG2Q96CW9 530 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 ELP4Q96EB1 424 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 ZBED6CLQ96FA7 236 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 CHMP6Q96FZ7 201 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 RMND5BQ96G75 393 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 METTL2AQ96IZ6 378 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 ZFP3Q96NJ6 502 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 TM9SF2Q99805 663 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 CCT7Q99832 543 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 MECRQ9BV79 373 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 TBL1XR1Q9BZK7 514 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 ACBD3Q9H3P7 528 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 DSN1Q9H410 356 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 PTGES2Q9H7Z7 377 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 ANKZF1Q9H8Y5 726 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 EML4Q9HC35 981 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 SDHAF3Q9NRP4 125 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 TAS2R7Q9NYW3 318 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 ABCG2Q9UNQ0 655 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 SPG11Q96JI7 2443 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 AKAP6Q13023 2319 aa8.76□□□□□ -1.01
NPLOC4-212ENST00000573328 UQCRHLA0A096LP55 91 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 TUBAL3A6NHL2 446 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 TMEM233B4DJY2 109 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 H3BML4 177 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 SYT5O00445 386 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 SEC14L5O43304 696 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 NPHS1O60500 1241 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 CHRNGP07510 517 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 PRPS2P11908 318 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 DDX5P17844 614 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 SDC1P18827 310 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 POU3F2P20265 443 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 CHMP24386 653 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 MAPK1P28482 360 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 ALDH3A1P30838 453 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 GABRA3P34903 492 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 CPOXP36551 454 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 HPCAL1P37235 193 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 ASMTP46597 345 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 LHX2P50458 406 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 ART1P52961 327 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 GFRA1P56159 465 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 GAB1Q13480 694 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 GANABQ14697 944 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 VPS26BQ4G0F5 336 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 ZNF385BQ569K4 471 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 KANK2Q63ZY3 851 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 PPP4R4Q6NUP7 873 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 ZCCHC23Q6ZST2 131 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 GALNT10Q86SR1 603 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 TRABD2AQ86V40 505 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 BANPQ8N9N5 519 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 NUP43Q8NFH3 380 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 SMPDL3BQ92485 455 aa8.75□□□□□ -1.01
NPLOC4-212ENST00000573328 PIK3R3Q92569 461 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms