RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GTPBP1O00178 669 aaKnown RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 NRMQ8IXM6 262 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ELMOD2Q8IZ81 293 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 PIGXQ8TBF5 258 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 DNAJA4Q8WW22 397 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 AKAP1Q92667 903 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 PHF21AQ96BD5 680 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 GTPBP2Q9BX10 602 aaKnown RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ZDHHC4Q9NPG8 344 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ZC3H12DA2A288 527 aaKnown RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 MAN2B1O00754 1011 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 HOXB3P14651 431 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 CSNK1G2P78368 415 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 GPR176Q14439 515 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 C9orf64Q5T6V5 341 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 FAM205BPQ63HN1 556 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 CNKSR3Q6P9H4 555 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 TIGD4Q8IY51 512 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 SIRT6Q8N6T7 355 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 LINC01555Q8NAE3 123 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ING5Q8WYH8 240 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 DIO2Q92813 273 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 CNRIP1Q96F85 164 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 BTBD1Q9H0C5 482 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ATG4BQ9Y4P1 393 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 A0A0G2JPF8 293 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 HNRNPCL2B2RXH8 293 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 HNRNPCL3B7ZW38 293 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 SGK494L7N484 410 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 MEN1O00255 615 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CASC3O15234 703 aaKnown RBP16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CRYZL1O95825 349 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 PRNPP04156 253 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 HNRNPCL4P0DMR1 293 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 MLC1Q15049 377 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF77Q15935 545 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF697Q5TEC3 545 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CPOQ8IVL8 374 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 NXPE3Q969Y0 559 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 LGR4Q9BXB1 951 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 H2AFY2Q9P0M6 372 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-205ENST00000571272 TNFRSF10DQ9UBN6 386 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CHST2Q9Y4C5 530 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 SIRT4Q9Y6E7 314 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-205ENST00000571272 C4orf51C9J302 202 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CHST10O43529 356 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 ADRB3P13945 408 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 AHRP35869 848 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CLCNKAP51800 687 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 ST3GAL3Q11203 375 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 FZD5Q13467 585 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 FAM27D1Q5T7N8 215 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 BCL2L15Q5TBC7 163 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF322Q6U7Q0 402 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-205ENST00000571272 AMIGO1Q86WK6 493 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 HCAR2Q8TDS4 363 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 CHFRQ96EP1 664 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 SLC38A1Q9H2H9 487 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 HINT3Q9NQE9 182 aaKnown RBP16.35■□□□□ 0.21
SCARF1-205ENST00000571272 ADAM30Q9UKF2 790 aa16.35■□□□□ 0.21
SCARF1-205ENST00000571272 A0A1W2PQ72 361 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 A0A1W2PR48 441 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 LRIT2A6NDA9 550 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 FABP7O15540 132 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 VEGFDO43915 354 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 ICMTO60725 284 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 TFPIP10646 304 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 DRD2P14416 443 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 UQCRC1P31930 480 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 TGM3Q08188 693 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 C19orf57Q0VDD7 668 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 C18orf63Q68DL7 685 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 CACUL1Q86Y37 369 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 TMEM255BQ8WV15 326 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 OR7D2Q96RA2 312 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 MENTQ9BUN1 341 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 PPIL3Q9H2H8 161 aaKnown RBP16.34■□□□□ 0.21
SCARF1-205ENST00000571272 MED20Q9H944 212 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-205ENST00000571272 CBLCQ9ULV8 474 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 NOTCH4Q99466 2003 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 TRAV6A0A075B6T7 132 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 A0A0A6YYJ9 748 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 ERI3O43414 337 aaKnown RBP16.34■□□□□ 0.21
SCARF1-205ENST00000571272 LATO43561 262 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 FCMRO60667 390 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 EFCAB14O75071 495 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 ADH1AP07327 375 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 RHOP08100 348 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 ERGP11308 486 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 SLC9A5Q14940 896 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 DHCR24Q15392 516 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 FCN2Q15485 313 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 OSTF1Q92882 214 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 CAMK1GQ96NX5 476 aa16.34■□□□□ 0.21
SCARF1-205ENST00000571272 COQ7Q99807 217 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms