RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GXYLT2A0PJZ3 443 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 C17orf51A8MQB3 221 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 EMC8O43402 210 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 CBR3O75828 277 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 NKX2-2O95096 273 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 IL33O95760 270 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 IGKV1D-16P01601 117 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 GLI4P10075 376 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 ACP2P11117 423 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PRPS1L1P21108 318 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 GABRA3P34903 492 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PRKAG1P54619 331 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PMPCAQ10713 525 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 DECR1Q16698 335 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 NHSL2Q5HYW2 709 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 EXOSC6Q5RKV6 272 aaKnown RBP11.87□□□□□ -0.51
CNOT1-220ENST00000569916 DCST1Q5T197 706 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 C1orf185Q5T7R7 199 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 CPTPQ5TA50 214 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 MFSD12Q6NUT3 480 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 ACAD11Q709F0 780 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 SZRD1Q7Z422 152 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 CAMKMTQ7Z624 323 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 YRDCQ86U90 279 aaKnown RBP11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PLCZ1Q86YW0 608 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 ULK2Q8IYT8 1036 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 CDRT4Q8N9R6 151 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PSMA8Q8TAA3 256 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 FBXO30Q8TB52 745 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PIK3R3Q92569 461 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 RND1Q92730 232 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
CNOT1-220ENST00000569916 UGT2B28Q9BY64 529 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 OR2B2Q9GZK3 357 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 PRDM14Q9GZV8 571 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 C3orf14Q9HBI5 128 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 ATAD3AQ9NVI7 634 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 FBXL2Q9UKC9 423 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 MAST4O15021 2626 aa11.87□□□□□ -0.51
CNOT1-220ENST00000569916 CELSR2Q9HCU4 2923 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 SCO2O43819 266 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 FADS1O60427 444 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 SNNO75324 88 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 GABRA1P14867 456 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 BMP7P18075 431 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 CHRNB4P30926 498 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 RFX3P48380 749 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 DIO3P55073 304 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 CLDN8P56748 225 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 PRR5P85299 388 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 VPS26BQ4G0F5 336 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 VASNQ6EMK4 673 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 CCDC71Q8IV32 467 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 LRRC34Q8IZ02 419 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 NATD1Q8N6N6 113 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 SLC16A11Q8NCK7 471 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 GPR151Q8TDV0 419 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 CA5BP1Q8WTZ4 195 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 ASB5Q8WWX0 329 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 OR5P2Q8WZ92 322 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 SLC9A6Q92581 669 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 RMND5BQ96G75 393 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 TIMP4Q99727 224 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 RTN4RQ9BZR6 473 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 BHLHE41Q9C0J9 482 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 CXorf36Q9H7Y0 433 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 MEAF6Q9HAF1 191 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 ZCCHC3Q9NUD5 404 aaKnown RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 FAM120CQ9NX05 1096 aaKnown RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 ALKBH4Q9NXW9 302 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 NKIRAS1Q9NYS0 192 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 MRTO4Q9UKD2 239 aaKnown RBP11.86□□□□□ -0.51
CNOT1-220ENST00000569916 ABCG2Q9UNQ0 655 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 PCNX3Q9H6A9 2034 aa11.86□□□□□ -0.51
CNOT1-220ENST00000569916 HNRNPRO43390 633 aaKnown RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 KCNH1O95259 989 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 UTS2O95399 124 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 C6orf47O95873 294 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 HOXD4P09016 255 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 SRD5A2P31213 254 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 PTGER4P35408 488 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 ADH7P40394 386 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 PSMD4P55036 377 aaKnown RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 LASP1Q14847 261 aaKnown RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 DUSP5Q16690 384 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 ACSF3Q4G176 576 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-220ENST00000569916 AGBL2Q5U5Z8 902 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 OR5M10Q6IEU7 315 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 ZCCHC12Q6PEW1 402 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 SEM1Q6ZVN7 128 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 FADS6Q8N9I5 356 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 RAB3IL1Q8TBN0 382 aa11.85□□□□□ -0.51
CNOT1-220ENST00000569916 FAM110BQ8TC76 370 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms